5 homologs were found in PanDaTox collection
for query gene Svir_27250 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_27250  hypothetical protein  100 
 
 
368 aa  716    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.354671  normal  0.303953 
 
 
-
 
NC_013093  Amir_5744  hypothetical protein  47.35 
 
 
290 aa  282  6.000000000000001e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6711  chromosome partitioning ATPase  41.35 
 
 
495 aa  63.9  0.000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1404  hypothetical protein  35 
 
 
436 aa  47.8  0.0003  Roseiflexus sp. RS-1  Bacteria  unclonable  0.000000355362  hitchhiker  0.00105308 
 
 
-
 
NC_008554  Sfum_3803  SPP1 family phage head morphogenesis protein  45.45 
 
 
1529 aa  42.7  0.01  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
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