9 homologs were found in PanDaTox collection
for query gene Svir_15230 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_15230  protein of unknown function (DUF227)  100 
 
 
404 aa  788    Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.332648 
 
 
-
 
NC_013093  Amir_1720  hypothetical protein  50.13 
 
 
394 aa  322  9.999999999999999e-87  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2318  protein of unknown function DUF227  41.85 
 
 
385 aa  212  1e-53  Gordonia bronchialis DSM 43247  Bacteria  normal  0.100619  n/a   
 
 
-
 
NC_014158  Tpau_1973  hypothetical protein  35.69 
 
 
368 aa  167  4e-40  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.270765  n/a   
 
 
-
 
NC_013131  Caci_8378  hypothetical protein  35.71 
 
 
346 aa  123  6e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.135782  normal 
 
 
-
 
NC_006365  plpp0130  hypothetical protein  24.12 
 
 
415 aa  75.1  0.000000000002  Legionella pneumophila str. Paris  Bacteria  normal  0.870685  n/a   
 
 
-
 
NC_012669  Bcav_0232  hypothetical protein  29.41 
 
 
417 aa  57.4  0.0000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7793  aminoglycoside phosphotransferase  28.77 
 
 
341 aa  57.4  0.0000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.301349 
 
 
-
 
NC_013947  Snas_5580  aminoglycoside phosphotransferase  27.87 
 
 
345 aa  49.3  0.0001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
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