Gene Amir_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1720 
Symbol 
ID8325905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1881662 
End bp1882846 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content74% 
IMG OID644942269 
Producthypothetical protein 
Protein accessionYP_003099514 
Protein GI256375854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGACCA CCGCTAGCCC TGTGGACGTC GAACCTGGAC TGCTCGACGC GGTCCGCGCT 
GCGGAGACCG TGCTCAGCAG TCGCTTCGGC GCCCGCGTCA CGCTCGCCGA CCCCGAGAAC
CTCGGTGGCG CGGGCCGGTC CACCGTGGCC AGGGTCAGGG TCGCGTCCAC TCCCTTCTCG
CTGCCGCGCA CCCTCGTGGT GAAGCGGTAC CCCGAGCAGG TGGCCGATCG CGACCCGTTC
GCGCACGAGG CCGCCAGCCA CAAGCTGCTC ACCGCGCTGC CCGCCGAGGA GCGGGCCACT
CCGGAGCTGT TCGCGCAGGA CACGCGCAAG CGCCTGGTGG TGCTGGAGGA CCTGGGCAAG
GCCCCGCGCC TGGCCGAGAA GCTGCTGGGC TCCGACGCGC GCGTCGCCGA GCGCGGCCTG
CTGTCCTGGG CGCACGCCAT GGGCAGGCTG CACGCCACCA CGGCGGGCCG CGACGCCGAC
TTCGACGCGC TCATGCGCAG GCAGGGCAGC CAGTGCTGCG CCGACCCGGT CGCGGTCGAC
CTGCACGTCG CCCTGGCCGG GCTGCCGGAC CTGCTGCGCG AGGTGCTGGG CGTGGACACG
CCGACGTCCG TGCTGGAGTT CGCCGACCAC GCGGTGCGCG GCTTCGGCAC CTCGCGGCAC
CGCGCGTTCA GCCCGTCCAC GTCCTGCCCG GACAACCACC TGGTCACCGG GCGCGGCGTG
CGGTTCCTGG ACTTCGAGGG CGGGTGCGTG CGCGACATCG TGTTCGACGC CGCCTGCCTG
CGCGTGCCGT TCCCGTCCTG CTGGTGCGCC TACGGCCTGC CTCCCGGCAT GTCCGAGGCG
ATGCTGGCGG CGTGGCGGGC CGAGGTGTCC TCGGTGTGGC CGGACCTGGA CGACGACGAC
GTGTTCCTGC CCAGGCTGCT GGAGGCGCAG CTGCTGTGGC TGTGGCTGGG CACCTGGCGC
GGGCTTCCCT CGCTGGAGGG CCAGGGCCAG AACGGGCACG GCAAGCGGCT GGACGTGCCG
CCGCGCATCC AGATCCTCAC CTCCCGGTGG GTCCGGCTGC GCACCGAGGC GCTGGGGCTC
GGGGTGAAGC ACGTGGCGGC GTTCGCGGAG GAGCTCGTGG ACGCGCTGGT CGCGCGGCAC
GGGAGTTCGG CGCTGGAACT GGCGCTGTAC CCCGCGTTCC GCTGA
 
Protein sequence
METTASPVDV EPGLLDAVRA AETVLSSRFG ARVTLADPEN LGGAGRSTVA RVRVASTPFS 
LPRTLVVKRY PEQVADRDPF AHEAASHKLL TALPAEERAT PELFAQDTRK RLVVLEDLGK
APRLAEKLLG SDARVAERGL LSWAHAMGRL HATTAGRDAD FDALMRRQGS QCCADPVAVD
LHVALAGLPD LLREVLGVDT PTSVLEFADH AVRGFGTSRH RAFSPSTSCP DNHLVTGRGV
RFLDFEGGCV RDIVFDAACL RVPFPSCWCA YGLPPGMSEA MLAAWRAEVS SVWPDLDDDD
VFLPRLLEAQ LLWLWLGTWR GLPSLEGQGQ NGHGKRLDVP PRIQILTSRW VRLRTEALGL
GVKHVAAFAE ELVDALVARH GSSALELALY PAFR