Gene Caci_8378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8378 
Symbol 
ID8339757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp9705616 
End bp9706656 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content71% 
IMG OID644961464 
Producthypothetical protein 
Protein accessionYP_003119042 
Protein GI256397478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.135782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAACGA CGGAGATCCT CGCAGCGGCC TCGGCGGTGC TCGGCACGGA GCTGACCGAC 
CCGGTCGATC TCGGCGGGAG CCACCGGAGC ACGGTGCTGC GGGTGCGCAC GGCCGCCGGA
GACACGGTGA TCCTCAAAGC CCATAAGGAG CACGCCGCCT ATGCCGCTGA GGCCGGCGGG
CTGCGGCTGA CGGACCTGGG TCCCCGGCTG CTCGCGGAGG ACGCGGAGCA CCTGCTGATC
GTCATGGAAG ACCTCGGCGA CGCCCCGAAC CTCGCCGATC TGCTGCTCGG CGGCGATGCG
GAACAGGCCC GCGCGGCGCT CATCCAGTGG GCCACGACGT ACGGGCGGCT CGCCGTGCAG
ACCGCGGGGC GCGAGAGCGA GCTGGGGCAG GCGTCCGGGC AGTGGGTCAC CGAGGACATG
GCGAAGCTGC CGGACCTCCT CAAGGTGCTC GACGTCGCGG CGCCGCCAGG GCTGGCCGCC
GACCTCGACG CGGTGACCGC CCTGGACCAC GACCGGTTCC GGGTCTTCTC GCCGGGCGAC
ATCTGCCCCG ACAACAATCT GCTGACGCCC GAAGGACTGC GGCCGATCGA TTTCGAGGGC
GCGGGATTCC ACTCGGTCTT CCTGGACGCC TCCTACAGCC GGATGCCGTT CGGGAGTTGC
TGGTGTGTGT ACCGGCTGCC GAAAAGCTTC TCGATGGAAG CGGAGCGCGC TTATCGCGGC
GAGGTGGTGC GGGTCTATCC GGAGTTGGCC GACGACCGGA TCTGGCGCCC CGGGGTGCGG
CTGGCGTCGG TCGCCTATGT GGTCGCGATG ACGCAGTGGC TGATGCCGGG CGCCGTGGAG
GAGGACCGGC CGATGAACCG GAAGCGCGAT CCGATCGCCA GCGTGCGGCA GGTGCTGCGC
TACCGGTGGG AGGTGACGGC GGCCGCATTG GAGCGCGCGG AGGAGCTGCC CGCCGCCGCG
GCGGTCTTCC GGGCGCTGCT GGCGCGGACG GAGGACTGGC TCGTGCCGGA TCTGCCGCGC
TACCCGGCGT TCAGCGCCTG A
 
Protein sequence
METTEILAAA SAVLGTELTD PVDLGGSHRS TVLRVRTAAG DTVILKAHKE HAAYAAEAGG 
LRLTDLGPRL LAEDAEHLLI VMEDLGDAPN LADLLLGGDA EQARAALIQW ATTYGRLAVQ
TAGRESELGQ ASGQWVTEDM AKLPDLLKVL DVAAPPGLAA DLDAVTALDH DRFRVFSPGD
ICPDNNLLTP EGLRPIDFEG AGFHSVFLDA SYSRMPFGSC WCVYRLPKSF SMEAERAYRG
EVVRVYPELA DDRIWRPGVR LASVAYVVAM TQWLMPGAVE EDRPMNRKRD PIASVRQVLR
YRWEVTAAAL ERAEELPAAA AVFRALLART EDWLVPDLPR YPAFSA