7 homologs were found in PanDaTox collection
for query gene Svir_01230 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_01230  hypothetical protein  100 
 
 
195 aa  395  1e-109  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0114  hypothetical protein  48.3 
 
 
250 aa  128  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1572  hypothetical protein  40.44 
 
 
269 aa  59.7  0.00000002  Tsukamurella paurometabola DSM 20162  Bacteria  decreased coverage  0.00182797  n/a   
 
 
-
 
NC_013595  Sros_7050  hypothetical protein  36.28 
 
 
144 aa  49.3  0.00004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.148055  normal 
 
 
-
 
NC_011886  Achl_2754  Tat pathway signal sequence domain-containing protein  34.9 
 
 
213 aa  45.8  0.0004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0026756 
 
 
-
 
NC_014165  Tbis_2362  hypothetical protein  31.25 
 
 
121 aa  43.5  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  0.767035  normal  0.0440412 
 
 
-
 
NC_013757  Gobs_1326  hypothetical protein  36.17 
 
 
136 aa  41.6  0.007  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
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