Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_01230 |
Symbol | |
ID | 8385461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 130282 |
End bp | 130869 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644974227 |
Product | hypothetical protein |
Protein accession | YP_003132038 |
Protein GI | 257054206 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGAGA ACAACGAAAA CGACGAGGAT CGGCCCGTGC GCGGTTCGAT GCGCTTCCAG GATCCTGCGA CGGCGACTCC TCGGGAACCG ACGCTGGCGG AGAAGCGGGC GCGGCTGAAG GCGATGGAGG AGCAGCGCCA GCGCGAGGAA GAGGCGCGGC GGGCGCAACT GGAAGCGGAG GCCAAGGCCG AGACCCGTCG CAAGGTGTTG GCCGGTGGCG GTGTGACGGT GGGCCTGGTC GGACTGGTCG CCGCGTGGTA CGTCGTGGCG GCGCCCGAGG ACGTCACGGC CGTGTGCACC ACCGCTGACG GCACCATCGT CGACGACGAC TACTGCGACG ACGACTACGT GCGAAGCCAC GGCGGTTACC ACGGCAGCGG CGGCTGGGTG TTCCTGCCGA GTCCGGGCGG CGGATACGAC CAGTACCGCT ACAACTACGG TGGCAGCGGC ACCGTGGGGC AGCGCGTGGC AGGCGGCACA TATGTCCGTC CCTCCAACGC GGAGATCAAG ACCAATTCGG GGAAGACCAT CCAGCGTGGT GGCTTCGGGA TCAGTGGCGG CAGCTTCGGC AAAGGTGGAG GCTCGTAG
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Protein sequence | MTENNENDED RPVRGSMRFQ DPATATPREP TLAEKRARLK AMEEQRQREE EARRAQLEAE AKAETRRKVL AGGGVTVGLV GLVAAWYVVA APEDVTAVCT TADGTIVDDD YCDDDYVRSH GGYHGSGGWV FLPSPGGGYD QYRYNYGGSG TVGQRVAGGT YVRPSNAEIK TNSGKTIQRG GFGISGGSFG KGGGS
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