Gene Svir_01230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_01230 
Symbol 
ID8385461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp130282 
End bp130869 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content68% 
IMG OID644974227 
Producthypothetical protein 
Protein accessionYP_003132038 
Protein GI257054206 
COG category 
COG ID 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGA ACAACGAAAA CGACGAGGAT CGGCCCGTGC GCGGTTCGAT GCGCTTCCAG 
GATCCTGCGA CGGCGACTCC TCGGGAACCG ACGCTGGCGG AGAAGCGGGC GCGGCTGAAG
GCGATGGAGG AGCAGCGCCA GCGCGAGGAA GAGGCGCGGC GGGCGCAACT GGAAGCGGAG
GCCAAGGCCG AGACCCGTCG CAAGGTGTTG GCCGGTGGCG GTGTGACGGT GGGCCTGGTC
GGACTGGTCG CCGCGTGGTA CGTCGTGGCG GCGCCCGAGG ACGTCACGGC CGTGTGCACC
ACCGCTGACG GCACCATCGT CGACGACGAC TACTGCGACG ACGACTACGT GCGAAGCCAC
GGCGGTTACC ACGGCAGCGG CGGCTGGGTG TTCCTGCCGA GTCCGGGCGG CGGATACGAC
CAGTACCGCT ACAACTACGG TGGCAGCGGC ACCGTGGGGC AGCGCGTGGC AGGCGGCACA
TATGTCCGTC CCTCCAACGC GGAGATCAAG ACCAATTCGG GGAAGACCAT CCAGCGTGGT
GGCTTCGGGA TCAGTGGCGG CAGCTTCGGC AAAGGTGGAG GCTCGTAG
 
Protein sequence
MTENNENDED RPVRGSMRFQ DPATATPREP TLAEKRARLK AMEEQRQREE EARRAQLEAE 
AKAETRRKVL AGGGVTVGLV GLVAAWYVVA APEDVTAVCT TADGTIVDDD YCDDDYVRSH
GGYHGSGGWV FLPSPGGGYD QYRYNYGGSG TVGQRVAGGT YVRPSNAEIK TNSGKTIQRG
GFGISGGSFG KGGGS