10 homologs were found in PanDaTox collection
for query gene Ssed_0709 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_0709  hypothetical protein  100 
 
 		 321 aa  659    Shewanella sediminis HAW-EB3  Bacteria  normal  0.0231385  hitchhiker  0.000131082 
 
 
-
 
NC_011313  VSAL_II0343  putative HTH-type transcriptional regulator  43.28 
 
 		 85 aa  55.8  0.000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.254339  n/a   
 
 
-
 
NC_009997  Sbal195_2349  XRE family transcriptional regulator  23.5 
 
 		 326 aa  53.5  0.000004  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_2233  XRE family transcriptional regulator  23.5 
 
 		 326 aa  53.5  0.000005  Shewanella baltica OS185  Bacteria  normal  0.383129  n/a   
 
 
-
 
NC_011663  Sbal223_2114  transcriptional regulator, XRE family  23.5 
 
 		 322 aa  53.5  0.000005  Shewanella baltica OS223  Bacteria  normal  0.092707  normal  1 
 
 
-
 
NC_009052  Sbal_2126  XRE family transcriptional regulator  26.14 
 
 		 326 aa  53.1  0.000006  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_2202  XRE family transcriptional regulator  23.42 
 
 		 293 aa  52  0.00001  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009783  VIBHAR_02617  hypothetical protein  39.73 
 
 		 315 aa  50.1  0.00006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_02615  hypothetical protein  32.18 
 
 		 142 aa  45.8  0.001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_2712  hypothetical protein  36.36 
 
 		 309 aa  42.7  0.007  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
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