12 homologs were found in PanDaTox collection
for query gene Spea_2831 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_2831  hypothetical protein  100 
 
 
322 aa  662    Shewanella pealeana ATCC 700345  Bacteria  normal  0.357274  n/a   
 
 
-
 
NC_008391  Bamb_3528  hypothetical protein  26.69 
 
 
281 aa  75.9  0.000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.113954  normal 
 
 
-
 
NC_010552  BamMC406_4011  hypothetical protein  27.14 
 
 
272 aa  73.9  0.000000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.81693  normal  0.540856 
 
 
-
 
NC_008061  Bcen_4249  hypothetical protein  28.5 
 
 
272 aa  70.5  0.00000000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4117  hypothetical protein  28.5 
 
 
272 aa  70.5  0.00000000003  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2832  hypothetical protein  24.9 
 
 
313 aa  66.6  0.0000000005  Shewanella pealeana ATCC 700345  Bacteria  normal  0.731194  n/a   
 
 
-
 
NC_007511  Bcep18194_B1919  hypothetical protein  27.75 
 
 
274 aa  61.2  0.00000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1320  hypothetical protein  31.8 
 
 
239 aa  58.9  0.0000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00381  hypothetical protein  26.21 
 
 
267 aa  55.8  0.0000009  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.90703  n/a   
 
 
-
 
NC_009656  PSPA7_1406  hypothetical protein  23.79 
 
 
267 aa  52.4  0.00001  Pseudomonas aeruginosa PA7  Bacteria  decreased coverage  0.00692246  n/a   
 
 
-
 
NC_008463  PA14_16340  hypothetical protein  25.12 
 
 
267 aa  50.4  0.00004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1319  hypothetical protein  30.61 
 
 
228 aa  45.4  0.001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>