16 homologs were found in PanDaTox collection
for query gene Spea_1984 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_1984  hypothetical protein  100 
 
 
79 aa  158  2e-38  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00531718  n/a   
 
 
-
 
NC_010506  Swoo_2181  hypothetical protein  56.92 
 
 
86 aa  68.6  0.00000000003  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.000000881606  normal  0.0380637 
 
 
-
 
NC_009092  Shew_1855  hypothetical protein  51.9 
 
 
88 aa  68.2  0.00000000004  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000389519  unclonable  0.00000199628 
 
 
-
 
NC_008700  Sama_1638  hypothetical protein  52.44 
 
 
88 aa  65.9  0.0000000002  Shewanella amazonensis SB2B  Bacteria  normal  0.106951  normal  0.182055 
 
 
-
 
NC_004347  SO_2479  hypothetical protein  52.63 
 
 
78 aa  50.4  0.000007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_2364  hypothetical protein  50.65 
 
 
80 aa  46.2  0.0001  Shewanella baltica OS185  Bacteria  hitchhiker  0.00105863  n/a   
 
 
-
 
NC_011663  Sbal223_1983  hypothetical protein  50.65 
 
 
80 aa  46.6  0.0001  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000137823  hitchhiker  0.000000000851334 
 
 
-
 
NC_009052  Sbal_2376  hypothetical protein  50.65 
 
 
80 aa  45.8  0.0002  Shewanella baltica OS155  Bacteria  hitchhiker  0.000217298  n/a   
 
 
-
 
NC_008321  Shewmr4_1850  hypothetical protein  61.4 
 
 
78 aa  45.4  0.0003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00168413  hitchhiker  0.000002493 
 
 
-
 
NC_009831  Ssed_2425  hypothetical protein  55 
 
 
78 aa  45.4  0.0003  Shewanella sediminis HAW-EB3  Bacteria  normal  decreased coverage  0.000000867114 
 
 
-
 
NC_008345  Sfri_1758  hypothetical protein  53.85 
 
 
77 aa  43.9  0.0007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.348968  n/a   
 
 
-
 
NC_009997  Sbal195_2479  hypothetical protein  48.72 
 
 
84 aa  43.9  0.0007  Shewanella baltica OS195  Bacteria  unclonable  0.0000000167852  decreased coverage  0.0000699142 
 
 
-
 
NC_008322  Shewmr7_2128  hypothetical protein  67.44 
 
 
78 aa  43.5  0.001  Shewanella sp. MR-7  Bacteria  normal  0.137783  hitchhiker  0.000222797 
 
 
-
 
NC_008577  Shewana3_1905  hypothetical protein  48.68 
 
 
78 aa  42.7  0.002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000255556  unclonable  0.0000000000549091 
 
 
-
 
NC_009438  Sputcn32_2128  hypothetical protein  67.44 
 
 
83 aa  41.6  0.004  Shewanella putrefaciens CN-32  Bacteria  normal  0.349967  n/a   
 
 
-
 
NC_007954  Sden_2135  hypothetical protein  66.67 
 
 
100 aa  40.8  0.006  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000196527  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>