5 homologs were found in PanDaTox collection
for query gene Smed_5551 on replicon NC_009621
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009621  Smed_5551  hypothetical protein  100 
 
 
441 aa  866    Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0620848 
 
 
-
 
NC_013172  Bfae_05900  Major Facilitator Superfamily transporter  40.48 
 
 
429 aa  219  8.999999999999998e-56  Brachybacterium faecium DSM 4810  Bacteria  normal  0.344917  n/a   
 
 
-
 
NC_014210  Ndas_1781  major facilitator superfamily MFS_1  40.73 
 
 
403 aa  210  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.961264  normal  0.558818 
 
 
-
 
NC_013093  Amir_3943  major facilitator superfamily MFS_1  36.81 
 
 
412 aa  145  1e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2591  major facilitator transporter  24.23 
 
 
397 aa  43.1  0.009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.101194 
 
 
-
 
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