Gene Amir_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_3943 
Symbol 
ID8328136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4622991 
End bp4624229 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content78% 
IMG OID644944419 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003101656 
Protein GI256377996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA CGCAGTCGAT CCCCCCACCA GCGCGCACGT CGCCGCCGAG GCGGGACATC 
GTACGGTGGC AGCTCGGTTC CGCGACCTCC GGCGTTCCCC AGGCCGCCGC CCCGATCGCC
TTCGGCCTGC TGGCGCTGCC GCTCACCGGC ACGGCCGAGT CCGGGGCCGC ACTCGTCTTC
GCCATGACCG CGGCCCAGGT GCTCGGCTCG GTCCCCCTCT CCCGGCTGGG CAGGCGCTTC
TCCCCGGTGC GCTACCTGCG CGCCCTGGTC GCCGTCCGCA CCGCCGCCTT CGCCGCCGCC
ACGGGCCTGG GCGCGGTGGG CGCGCCGTTC GCCGCGCTGG TCGCCGCCGT CGTCGTGGCG
GGCGCGGTCA GCGGGGCCGC GCACGGCTAC CAGCGGCTCC TGCTCAACCA CCTGGTCTCC
CCCGGCCGCC TGCCCAGGGC GCTGGGCGTG GCCGCCACGC TGAACGAGGT CACCTTCGCG
CTCTCCCCCG TGCTCGCGTC GCTGGTCGGC TCGGCGTCGC CGGTGTGGGC GATGGCGATG
ATCACCGTGC TCGGGCTGGG CCCGGCCGTG CTCACGCCCC GCGTCCCGGA CATGCGCGCG
GTCCCGGACG CGGCACCGGA CGCGGCACCG GACGCGGTCC CGGACGCGAC ACCGGCCGGT
GGCGGGCTCC CCCGCGAGGC GCTGGTGTGG TTGTGCTGCG CGGCGGCGGG CAGCGGCGCG
GTCGCGGCGG TGGAGGTCGG CGCGGTCTCG TTCGCGCTCG CCTTCGACCT CGGTCCGGGG
TGGGCGTTCC TGTTCGCCTC CGTGCTGTGC GCGGGCTCGG TCCTGGGCGG GATCAGGGTG
AGCGTGCGCA ACCGCGTCCC GAGCACCGCC GCGGTCGCCG GTTACCTGGC CGCCAGCACC
GCGGGCGCCT GCGCGACGTT GGCGGGCGGG CACCTCGTGG TGACCCTGGC GGGCGCGGCG
GTGCTGGGGT TCTTCCTGCC GCTGCTGGGC ACGTTCTACT CGCTGGCGCT GGACGCGCTC
GCGCCGCCGC ACCGCAAGGC CGAGGTGTTC GCGCTGCAGC GGGTGGCGGG CGCGGTCGGG
GTGATCTCGG TCAGCGGGCT GCTGGCCCTG CTGGGACTCC GGGCCGCGCT GATCGGCGGC
GCCACCCTGC TGCTGGCCGC CACCTGCCTG GTCGCGCTGC GCGCCGCCCT GCCCCGGTTC
CGTCCGCTCG GGACGGAACC GGGGCCTCTC GGCGGCTAG
 
Protein sequence
MTATQSIPPP ARTSPPRRDI VRWQLGSATS GVPQAAAPIA FGLLALPLTG TAESGAALVF 
AMTAAQVLGS VPLSRLGRRF SPVRYLRALV AVRTAAFAAA TGLGAVGAPF AALVAAVVVA
GAVSGAAHGY QRLLLNHLVS PGRLPRALGV AATLNEVTFA LSPVLASLVG SASPVWAMAM
ITVLGLGPAV LTPRVPDMRA VPDAAPDAAP DAVPDATPAG GGLPREALVW LCCAAAGSGA
VAAVEVGAVS FALAFDLGPG WAFLFASVLC AGSVLGGIRV SVRNRVPSTA AVAGYLAAST
AGACATLAGG HLVVTLAGAA VLGFFLPLLG TFYSLALDAL APPHRKAEVF ALQRVAGAVG
VISVSGLLAL LGLRAALIGG ATLLLAATCL VALRAALPRF RPLGTEPGPL GG