Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5551 |
Symbol | |
ID | 5319853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 516499 |
End bp | 517824 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777300 |
Product | hypothetical protein |
Protein accession | YP_001314232 |
Protein GI | 150377637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0620848 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCAA GTCACCGCAC GCGGGGTGCA CCCACCAACT GTGCTGAAAA TACTTCGAAA GGTTTACCTG CGGACGATAC GGCCAGAATT GACGGAAAAA TGAACTGGGG CGGTCTACAA AGTCATCAGA CTATCCGCTG GGCGGTCGCC TACGGCTTGT TCGGCGCGCC CCGCTCAGGA GCGTCGATAG CCTTCGCCTT GGCAGCACTC TCGATCACGG GCAACCCCGC CAGTGGGGCA ACGGCGCTCG CGGCCATGAC AGCCGCGCAA CTTGTCGGAG CCTTGCCAAT TGCCCGGTTG GGGCGGGGTG CGAACTCAAT CGCATTCTTC AAGGCTCTCA TCTTTATTCG GACGGTAGCA CTGTTCGCTT GCGCTACTGC ATGTGGAGTG GGTGCGCCGT ACGCGGTTTT CATCGCTTCG GCAGTGGCCG CTGGCCTCGT GCAAGGTGCG GCCTTCGGCT ATCTGCGTGA CAGCGCAAAC TATCTCGTTG TGCAGTCACA GATGACAAGG GCCCTTGCCT TGGCAGCTTT TGCATCGGAC CTCACCTTCC TCGTCACCCC GATTCTGGCA GCCAGTCTTG GATCGGTGTC CGCATCCTTC TCGATAGCTG TCATCGCGAT ACTCGGCGCG GTGCCTGCAA TGATCTTGCC GTCCGCAAGA GGCAATGTGG AGCCGCAAGC GGTGGAAACC CGAACAAGAT CGCTGACGCC TGAAGTCCTT CTCTGGCTCG GATGCGCCTG TGCCAGTTCC GCCGCGATCA GCGGCATCGA AGTTGGCGCG GTCTCGCTTG CGATGGGGTT CGACCTGCAA GCAGGGTACG GCGCGATATT CACTGGAACC CTGTGTGCGG CGTCGCTTGT CGGATCCGTG GGAAACGGCC TGCTCAACAA AGCCTACTCG AAGCAGCATG TCGCGGCGAT GTTCCTCTCG ATCATTATCG GCATGGCGCT GATACTTCAG AATTCCTTCG GGTTATCGAT ACTCGGCTGC GCGCTTGTCG GGATATGCGC CCCCTCGCTC GGCATCCACT ACTCATTGCA GCTCAACAGA CTGGTGACGC CAGAAATGAG GGCTGAGGTT TTCTCCGTGC TGAAAATTTC GACTTCATTG GGAACTATCC TAGCCTCGGC GACGCTCGGC TGGACTTCTG TCACGTTTGC CCTGACCGCT TCGATATGGA TACTTGCTTG CGCGCTGGCC GCAATTCTCT CGAAGGACTT CATCATTGGG CGGCGGTTGT CCGAGACGCG CCTCAGTGGC GGCGCCGAAC TAGCGACGGC CCCTGCCCTG ACCGCGGGGC GACGAAGTGA ACGGAATGAC CGTTGA
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Protein sequence | MFPSHRTRGA PTNCAENTSK GLPADDTARI DGKMNWGGLQ SHQTIRWAVA YGLFGAPRSG ASIAFALAAL SITGNPASGA TALAAMTAAQ LVGALPIARL GRGANSIAFF KALIFIRTVA LFACATACGV GAPYAVFIAS AVAAGLVQGA AFGYLRDSAN YLVVQSQMTR ALALAAFASD LTFLVTPILA ASLGSVSASF SIAVIAILGA VPAMILPSAR GNVEPQAVET RTRSLTPEVL LWLGCACASS AAISGIEVGA VSLAMGFDLQ AGYGAIFTGT LCAASLVGSV GNGLLNKAYS KQHVAAMFLS IIIGMALILQ NSFGLSILGC ALVGICAPSL GIHYSLQLNR LVTPEMRAEV FSVLKISTSL GTILASATLG WTSVTFALTA SIWILACALA AILSKDFIIG RRLSETRLSG GAELATAPAL TAGRRSERND R
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