6 homologs were found in PanDaTox collection
for query gene Smed_1907 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_1907  hypothetical protein  100 
 
 
250 aa  505  9.999999999999999e-143  Sinorhizobium medicae WSM419  Bacteria  normal  0.392315  normal 
 
 
-
 
NC_013171  Apre_0808  hypothetical protein  31.58 
 
 
314 aa  53.5  0.000003  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00000655713  n/a   
 
 
-
 
NC_011083  SeHA_C0384  DNA replication protein gp18  31.16 
 
 
271 aa  47  0.0003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0966455  hitchhiker  0.00000000000236015 
 
 
-
 
NC_011205  SeD_A0624  DNA replication protein gp18  29.37 
 
 
277 aa  46.2  0.0005  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  decreased coverage  0.00127495 
 
 
-
 
NC_013517  Sterm_2859  hypothetical protein  30.21 
 
 
284 aa  44.7  0.002  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.351033  n/a   
 
 
-
 
NC_011353  ECH74115_2921  replication of DNA  26.67 
 
 
273 aa  42.4  0.008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.274464  hitchhiker  6.39526e-16 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>