Gene Smed_1907 details

Gene Information

• Locus tag: Smed_1907
• ID: 5322765
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sinorhizobium medicae WSM419
• Kingdom: Bacteria
• Replicon accession: NC_009636
• Strand: -
• Start bp: 1970537
• End bp: 1971289
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640790844
• Product: hypothetical protein
• Protein accession: YP_001327576
• Protein GI: 150397109

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.392315
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATCA GTGCCGCCAT CCGCCGCATG TTGGAAGCTG GTCTCACGAT CGAGCAAGCC 
CTCGTGGCCG CCGAGGCTTT CGAAGCCGAG GCTGAAACTG TTCCGGCCGT CGATCGTGCT 
GCAGTGAAGA GACGCGCGTG GGATCGCGAA CGGAAGCGTA AACAGCGGAA TTCCGCCTTG 
TCCGGTGGAA GTCCGGTGGA AACAGGTGGA CAGCAGGTGG ACTCCGAGAC CCTTTCCTCC 
CCGGAGGTTT CCCCCCACAC CCCCCTTCCT AACCCCTCCA ATCCTATACC CCCTTCGCCC 
CCCAAGGGGG GCTCTTCCCC CACGGCGGTC GACCAGGTCG TGACGGCATT TTCGGAAATG 
GCGCGCCAGT CCGGGCTTTC CGTGCCGAGG GCCGTCACGG CCTCTCGCCG TCGCTCGTTG 
CTGCTGCGGA TCGAGGAACA CGGCCTGCCG GCGGTTCTCG ATGCCATCGA GCGCATCGGC 
CGCAGCCGGT TCTGCCGTGG CGAAAACGAC CGCGGCTGGC GCGCTGACCT CGATTTCCTC 
TGCCAGCCTA AGAGCTTCGT CTCGATCCTC GAAGGCAAAT ACGACGACCG GCCGCAGCAA 
TCGCAAGCAC CGCCTCGTGA AAGCGAACAC GCCCGCCATC AGCGGGAATG CCGAGAAGCC 
ATCCAACGGA AACTGAACGG AAATGGACAT GACGAATTTG CCAGCACCGG CCCAGCTTTC 
GACCTTGAAC CGGGAGATTT CCGCGCTCAC TGA 

 

Protein sequence

MSISAAIRRM LEAGLTIEQA LVAAEAFEAE AETVPAVDRA AVKRRAWDRE RKRKQRNSAL 
SGGSPVETGG QQVDSETLSS PEVSPHTPLP NPSNPIPPSP PKGGSSPTAV DQVVTAFSEM 
ARQSGLSVPR AVTASRRRSL LLRIEEHGLP AVLDAIERIG RSRFCRGEND RGWRADLDFL 
CQPKSFVSIL EGKYDDRPQQ SQAPPRESEH ARHQRECREA IQRKLNGNGH DEFASTGPAF 
DLEPGDFRAH