11 homologs were found in PanDaTox collection
for query gene Shewmr7_2307 on replicon NC_008322
Organism: Shewanella sp. MR-7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008322  Shewmr7_2307  hypothetical protein  100 
 
 
318 aa  640    Shewanella sp. MR-7  Bacteria  normal  0.71973  normal  0.0278628 
 
 
-
 
NC_008321  Shewmr4_2231  hypothetical protein  74.92 
 
 
311 aa  493  9.999999999999999e-139  Shewanella sp. MR-4  Bacteria  normal  0.264397  normal  0.0403681 
 
 
-
 
NC_008322  Shewmr7_3394  hypothetical protein  34.84 
 
 
310 aa  202  7e-51  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_01640  hypothetical protein  25.42 
 
 
294 aa  63.5  0.000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009783  VIBHAR_01669  hypothetical protein  43.75 
 
 
297 aa  54.7  0.000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2126  XRE family transcriptional regulator  32 
 
 
326 aa  50.8  0.00003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2233  XRE family transcriptional regulator  32 
 
 
326 aa  50.8  0.00003  Shewanella baltica OS185  Bacteria  normal  0.383129  n/a   
 
 
-
 
NC_009997  Sbal195_2349  XRE family transcriptional regulator  32 
 
 
326 aa  50.8  0.00003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_2114  transcriptional regulator, XRE family  32 
 
 
322 aa  50.8  0.00003  Shewanella baltica OS223  Bacteria  normal  0.092707  normal 
 
 
-
 
NC_011313  VSAL_II0343  putative HTH-type transcriptional regulator  34.38 
 
 
85 aa  48.9  0.0001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.254339  n/a   
 
 
-
 
NC_011313  VSAL_II0362  hypothetical protein  43.9 
 
 
296 aa  44.3  0.003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0710917  n/a   
 
 
-
 
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