10 homologs were found in PanDaTox collection
for query gene Shel_19200 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_19200  protein of unknown function (DUF1836)  100 
 
 
172 aa  360  6e-99  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.0398564 
 
 
-
 
NC_013204  Elen_1942  hypothetical protein  37.72 
 
 
181 aa  89  3e-17  Eggerthella lenta DSM 2243  Bacteria  normal  0.318368  normal  0.0759806 
 
 
-
 
NC_004116  SAG1318  hypothetical protein  31.9 
 
 
149 aa  71.6  0.000000000005  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_1758  hypothetical protein  33.03 
 
 
175 aa  66.6  0.0000000001  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_3211  hypothetical protein  27.15 
 
 
198 aa  55.8  0.0000003  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000281051  n/a   
 
 
-
 
NC_008528  OEOE_0941  BS_ykrK family protein  28.16 
 
 
158 aa  55.5  0.0000004  Oenococcus oeni PSU-1  Bacteria  normal  0.253763  n/a   
 
 
-
 
NC_013216  Dtox_0574  hypothetical protein  34.57 
 
 
196 aa  48.5  0.00005  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_1353  hypothetical protein  29.87 
 
 
212 aa  46.6  0.0002  Clostridium phytofermentans ISDg  Bacteria  normal  0.723305  n/a   
 
 
-
 
NC_010001  Cphy_1142  hypothetical protein  25 
 
 
186 aa  43.1  0.002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000000605466  n/a   
 
 
-
 
NC_013595  Sros_5248  putative transcriptional regulator, TetR family  27.05 
 
 
227 aa  42  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.66171 
 
 
-
 
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