| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19200 |
|---|
| Symbol | |
|---|
| ID | 8395809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2153959 |
|---|
| End bp | 2154477 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644986671 |
|---|
| Product | protein of unknown function (DUF1836) |
|---|
| Protein accession | YP_003144285 |
|---|
| Protein GI | 257064613 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0398564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTC AGGATCAAAT GAAAAACTTT CATCTTCCTC GGTATAGAGA GATACCCGAT
GTCGGCCTGT ACCTGGAGCA ATGCATAGAA TTCATCAACT CCTGCTTGGC GCCGCTAGGG
GCGGACATCT CAATAACGCC ATCTATGCTC AGCAATTATG TGAAGAGGGG TTACATCGAA
AGGCCGGTCA GGAAGCGGTA TCATGCCGAT CAGATTTCAT ACCTCATGTT CATCACGCTT
GCCAAACGGG TCTTGTCGAT GGAGAATATC GTTGGCATGT TCAAGTTGCA ACAGAGCACC
TACGGCATCG AAATCGCCCA TGACTATTTC TGCAACGAGT TCGAATCCCA TCTCAAGTAC
CTGTTCAAAA CAGGGGCTCA ACCAGGAACG ATAGAGGAGG ATGCGACTTT CGCCAAGCGC
ACCCTGCGCA ATGTCATCAT CGCGCTCACC CACATCATTT ATTTGGATTC GTGCTTCACC
AGTGACGAGT TCCTGGAGGA AATCGGCCAA TCCCAGTAA
|
|---|
| Protein sequence | MAAQDQMKNF HLPRYREIPD VGLYLEQCIE FINSCLAPLG ADISITPSML SNYVKRGYIE
RPVRKRYHAD QISYLMFITL AKRVLSMENI VGMFKLQQST YGIEIAHDYF CNEFESHLKY
LFKTGAQPGT IEEDATFAKR TLRNVIIALT HIIYLDSCFT SDEFLEEIGQ SQ
|
|---|
| |