9 homologs were found in PanDaTox collection
for query gene Shel_02980 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_02980  Putative inner membrane protein (DUF1819)  100 
 
 
196 aa  407  1e-113  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0555  hypothetical protein  33.51 
 
 
204 aa  120  9.999999999999999e-27  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_1682  hypothetical protein  32.45 
 
 
204 aa  120  1.9999999999999998e-26  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000662997 
 
 
-
 
NC_009429  Rsph17025_3736  hypothetical protein  31.58 
 
 
206 aa  112  3e-24  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007969  Pcryo_1611  hypothetical protein  34.38 
 
 
199 aa  108  7.000000000000001e-23  Psychrobacter cryohalolentis K5  Bacteria  normal  0.373105  normal  0.0609568 
 
 
-
 
NC_013730  Slin_4842  hypothetical protein  23.08 
 
 
211 aa  61.6  0.000000008  Spirosoma linguale DSM 74  Bacteria  normal  0.218151  normal  0.118395 
 
 
-
 
NC_009800  EcHS_A0336  hypothetical protein  22.3 
 
 
213 aa  45.8  0.0004  Escherichia coli HS  Bacteria  hitchhiker  0.00364036  n/a   
 
 
-
 
NC_012793  GWCH70_1296  hypothetical protein  18.64 
 
 
199 aa  45.8  0.0004  Geobacillus sp. WCH70  Bacteria  normal  0.549886  n/a   
 
 
-
 
NC_008609  Ppro_2291  hypothetical protein  19.77 
 
 
204 aa  44.7  0.001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
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