| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_02980 |
|---|
| Symbol | |
|---|
| ID | 8394190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 365605 |
|---|
| End bp | 366195 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644985069 |
|---|
| Product | Putative inner membrane protein (DUF1819) |
|---|
| Protein accession | YP_003142715 |
|---|
| Protein GI | 257063043 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCGA ACTACAGCCT GTCAATGAGT GGCTCGAAGG TGCGCATGCA GGAGAGCATG
CTGGCCGTCG AGATATACAA CGAGACTAAG GACTGGAGCG AGGTCCGCAG GAGAATCATT
GACGAGAACC TTTTCCAGCT AAATGCCGTG AGCTCGCGAA AGCGGGTCAC TGGCGAGATA
GTGAAGCGAC TCCGCACGCT GACGGACGCC GAACTCGAAT TCCTGCAAGG ATCATACGGA
GACGACAGAT GCGCCATGTT CTGGGTGGCC GTATGCAGGA CGTACCAATT CGTGAGGGAT
CTGTCGGAGC AGATGATCGC CGGCAGGTAC AACAGGACAA TTCCAGACTT CACCATGGAA
GCATACGATG CGTTCTTCGA AGAGCAGGCA GAGATTCACC CTGAGCTGAC AGCGCTGTCG
GACGAGGGTA GGAAGAAAAT GCGGAACCAA GTATTCCTCA TGCTCGCGGA ATGCAAGCTG
CTCTCCGAAG ATGCTCGGAT CACACCGCTA TATCCAACGC CAATGTTCAA AAACGCCCTC
GATCCGTCCA GGAAAGACGA CCTGCGGCTG TTCCCGGGGA GGCTGATCTA A
|
|---|
| Protein sequence | MSSNYSLSMS GSKVRMQESM LAVEIYNETK DWSEVRRRII DENLFQLNAV SSRKRVTGEI
VKRLRTLTDA ELEFLQGSYG DDRCAMFWVA VCRTYQFVRD LSEQMIAGRY NRTIPDFTME
AYDAFFEEQA EIHPELTALS DEGRKKMRNQ VFLMLAECKL LSEDARITPL YPTPMFKNAL
DPSRKDDLRL FPGRLI
|
|---|
| |