Gene Slin_4842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4842 
Symbol 
ID8728606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5893753 
End bp5894388 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389619 
Protein GI284039689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.218151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.118395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTAC CTACAATTCA CTACTCAGCT TCCTTCACGA CCGGTGCTTT ACTCCAAGAG 
GAAACACGGG CTCTACTTAC CTTGATGGAG CAAGTACCAA TGGACCAGGT ATATGACCGG
GCGAAAAAGG ACTCGGATTA TTTAAAAATC AATTCGGAAG TCGCCCGGCG AAAAATAGCG
GGCGAGGTTT TAAAACGGTA TAAAGCTGTT GATCAGGGTG TATGGCAGTT CTTTCAATCA
CGGGTGCGAA CCAATGAACA GTCCATACTC TTATTCTATG TTTGTCTGAA AACCTATACT
CTACTGTTTG ACTTTGTTCA AGGTGTAGTT GTTCGTCGAT GGCAACAACG ATTACTATCA
CTGGATAAGA GCGATTTCGA GCGATTTCTT GACACGCTTA TACCAACACA TCCTGAATTA
CAAAAATTGA CTGAAGCTAC GCGCCGAAAA TTGGCCCAGA TAACGATGCT TATGTTAAAG
CAAGCAGGGT TGCTGGAACG GGGACAATTA GTCACACCTT CTCTAGGAGC TGAAGTCTGG
CAGTTTTTTA TTGATCAAGA CGACGACTGG ATGTTGGACG CAGGTATGTT AACTCGCGCC
GACCGGGAAC GCCTTGGCTT ATTACTACAC GAATGA
 
Protein sequence
MLLPTIHYSA SFTTGALLQE ETRALLTLME QVPMDQVYDR AKKDSDYLKI NSEVARRKIA 
GEVLKRYKAV DQGVWQFFQS RVRTNEQSIL LFYVCLKTYT LLFDFVQGVV VRRWQQRLLS
LDKSDFERFL DTLIPTHPEL QKLTEATRRK LAQITMLMLK QAGLLERGQL VTPSLGAEVW
QFFIDQDDDW MLDAGMLTRA DRERLGLLLH E