8 homologs were found in PanDaTox collection
for query gene Sfri_3480 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_3441  TetR family transcriptional regulator-like protein  100 
 
 		 135 aa  270  3e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.520942  n/a   
 
 
-
 
NC_008345  Sfri_3480  TetR family transcriptional regulator-like protein  100 
 
 		 135 aa  270  3e-72  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_1215  TetR family transcriptional regulator-like protein  50.39 
 
 		 136 aa  125  2.0000000000000002e-28  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010087  Bmul_5713  TetR family transcriptional regulator-like protein  45.57 
 
 		 145 aa  65.1  0.0000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_4323  hypothetical protein  36.8 
 
 		 159 aa  64.7  0.0000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_010070  Bmul_6275  hypothetical protein  35 
 
 		 145 aa  64.3  0.0000000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.219108 
 
 
-
 
NC_010679  Bphyt_7361  TetR family transcriptional regulator-like protein  35.43 
 
 		 130 aa  63.5  0.0000000008  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010553  BamMC406_6752  TetR family transcriptional regulator-like protein  35.92 
 
 		 146 aa  58.9  0.00000002  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
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