9 homologs were found in PanDaTox collection
for query gene SeD_B0002 on replicon NC_011204
Organism: Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010468  EcolC_3432  putative transposase YhgA family protein  90.73 
 
 		 657 bp  848    Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011204  SeD_B0002    100 
 
 		 873 bp  1731    Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.130592  normal  0.607345 
 
 
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NC_011080  SNSL254_A4666    96.27 
 
 		 321 bp  535  1e-150  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.510567  normal  1 
 
 
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NC_010158  YpAngola_0122  putative transposase  89.24 
 
 		 942 bp  178  1.9999999999999998e-42  Yersinia pestis Angola  Bacteria  normal  1  hitchhiker  1.2156300000000001e-29 
 
 
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NC_010158  YpAngola_0115  putative transposase  87.03 
 
 		 306 bp  176  6.999999999999999e-42  Yersinia pestis Angola  Bacteria  hitchhiker  3.91333e-16  hitchhiker  6.87308e-79 
 
 
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NC_009832  Spro_0599  putative transposase YhgA family protein  78.34 
 
 		 957 bp  161  4e-37  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_0086  putative transposase  85.29 
 
 		 960 bp  56  0.00002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.864811  n/a   
 
 
-
 
NC_010159  YpAngola_A0084  hypothetical protein  85.29 
 
 		 960 bp  56  0.00002  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_4129  putative transposase YhgA family protein  85.29 
 
 		 960 bp  56  0.00002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.683023  n/a   
 
 
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