Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3432 |
Symbol | |
ID | 6067887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3751949 |
End bp | 3752605 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641602842 |
Product | putative transposase YhgA family protein |
Protein accession | YP_001726374 |
Protein GI | 170021420 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTCC GCCTCATACG CTATGCGGTA GCCGCCATGC AGCGCCACCT GGAGGCAGGG CATAAAAAAC TGCCACTGGT GATACCGGTG CTGTTCTATA CGGGTAAGCG CAGCCCGTAT CCGTACTCTA CTCGTTGGCT GGATGAATTT GACGCTCCCG AGCTGGCAGG CAAACTCTAC AGCAACGCTT TCCCGCTGGT AGACGTTACG ATCATTCCGG ATGATGAAAT CGCTGGCCAT CGCAGCATGG CCGCCCTGAC TTTACTGCAA AAGCATATTC ACCAGCGGGA CCTGGCAGAA CTGGTCGACC GGCTGGCACC CATCTTGCTG GCGGGATACT TGTCTTCATC GCAGGTGATA TCGCTGGTAC ACTATATAGT GCAGGCAGGC GAAACATCCG ACGCCGAAGC CTTTGTACGC GAACTGGCAC AGCGTGTGCC GCAACACGGA GACGCACTTA TGACCATCGC ACAACAGCTT GAACAGAAGG GCATCGAGAA GGGGATTCAG CTCGGTGAAC AACGCGGCAT TGAAAAAGGC AAGCGCGAAG CCACCCTTAA AATTGCACGA ACCATGCTCC AGAACGGCAT TGACCGCAAT ACCGTCATAA AAATGACCGG TCTGACTGAA GACGACCTGG CGCAGATCCG CCACTAA
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Protein sequence | MAFRLIRYAV AAMQRHLEAG HKKLPLVIPV LFYTGKRSPY PYSTRWLDEF DAPELAGKLY SNAFPLVDVT IIPDDEIAGH RSMAALTLLQ KHIHQRDLAE LVDRLAPILL AGYLSSSQVI SLVHYIVQAG ETSDAEAFVR ELAQRVPQHG DALMTIAQQL EQKGIEKGIQ LGEQRGIEKG KREATLKIAR TMLQNGIDRN TVIKMTGLTE DDLAQIRH
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