12 homologs were found in PanDaTox collection
for query gene SbBS512_E1452 on replicon NC_010658
Organism: Shigella boydii CDC 3083-94



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010658  SbBS512_E1452  hypothetical protein  100 
 
 
355 aa  738    Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3760  hypothetical protein  31.56 
 
 
377 aa  163  5.0000000000000005e-39  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.00000361746  n/a   
 
 
-
 
NC_007760  Adeh_3621  hypothetical protein  31.28 
 
 
377 aa  162  7e-39  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0000926642  n/a   
 
 
 
NC_011071  Smal_4039  hypothetical protein  30.28 
 
 
362 aa  155  7e-37  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.71003  normal  0.672629 
 
 
-
 
NC_010644  Emin_1452  hypothetical protein  29.51 
 
 
359 aa  121  1.9999999999999998e-26  Elusimicrobium minutum Pei191  Bacteria  normal  0.0107182  normal 
 
 
-
 
NC_009720  Xaut_0815  hypothetical protein  24.59 
 
 
361 aa  118  9.999999999999999e-26  Xanthobacter autotrophicus Py2  Bacteria  decreased coverage  0.000167187  normal 
 
 
-
 
NC_009921  Franean1_6767  hypothetical protein  25.21 
 
 
362 aa  100  3e-20  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0387  hypothetical protein  21.61 
 
 
370 aa  56.6  0.0000006  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0546968  normal 
 
 
-
 
NC_009075  BURPS668_A0032  hypothetical protein  26.32 
 
 
225 aa  50.4  0.00004  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00000358988  n/a   
 
 
-
 
NC_008782  Ajs_2452  hypothetical protein  20.7 
 
 
367 aa  49.7  0.00008  Acidovorax sp. JS42  Bacteria  normal  0.388897  normal  0.887643 
 
 
-
 
NC_007005  Psyr_4511  hypothetical protein  23.76 
 
 
362 aa  49.3  0.0001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.139612 
 
 
-
 
NC_013159  Svir_17090  hypothetical protein  21.46 
 
 
362 aa  42.7  0.009  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385932 
 
 
-
 
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