Gene Plav_0387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0387 
Symbol 
ID5456844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp418572 
End bp419684 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content51% 
IMG OID640875952 
Producthypothetical protein 
Protein accessionYP_001411667 
Protein GI154250843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0546968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTT ATTACCCTAG TGTGCGTTTT AAGCAGGGAG AGCGGTACGC GCTCTACAGG 
ATGCCTCAGG ATATGAAGCG TCATGTTGAG CCGCGGCTCA TCGCTCCTCC CATAAAGGAG
TACGACCCGG AGTTGGGAAG GATTCCTACC CTTGATGAAG TCATTTATCT GACGGGGGAG
AGAATCGGCA AGCATTGGCC AATAGGGCGA GCATTCTTGG ATCTTAGCTT TATAGCGGAT
GAAGTCGGTG AAGTTGGAAT AAAGCGAATT TTGGAGCTTG CTCAAATCCG CAATCAGGAG
ATCGTTCCTG TTGCAACTTT GCGCGACCTT CAAAACCCTT CGCTTCGCGA TGTGCGTGGG
AAGGGAAAAA TAAAACTAGC TGTTTTGGTT GGATACGAAG AGGTCGAAGT CGAGTCCGTC
CGCAACGCAC TTAAAGAGGC GGGGCTTGAT GCTTCCGATT GCGTTATCTT TCTAGATTTT
AAAGGGGCTC CTCTAAAGCC CGAAATTGCT GCGGGAGCAG TTGCGTCGAT ATTTGATACC
GCAAACGAAA TCGGCAGGTG GCAGCGTATA GTCTTTCAAG CATCAAACTT CCCCTCAAAG
AATCCGGCTG GACACGGAGA AAGTGTGCTA ATTCCCCGCG ACGAGTGGTC CGCTTTCCAT
GCGGCGATGC TTGAATGTGG TGTCGCACCT GAGCGAGTTG GCTATGGAGA CTTTGCTGCG
GATAGTTCCG AGATTAAATT TCCAAAAAAG AAAAAGAAGG GCGGGGGAGG TCGTGCAATC
CGTCATCTTC GGTACGCAAC AGCTACGCAT TGGTTCGTCG TTCGGGCGCA ATCTGAGGGT
TGTGACGCTG ATCTGATGCG AGACGTTTGT CAGCGGATTT CAAACAGCGT CCATTATGAA
GGGCGCTCGT TTTCTTACGC GGATAACCGG ATATTTTTGG TGGGGCAGGC GAAGGTAGGT
CCGGGAACTG CATCTATGTG GCGCGAGTGG AATACTCTTC ACCACATTAC TCGTGTCGTC
CGCGATTTGG GGGCTATGGC GGGGGTGCAA TTCGCAGATC GGCCGGTGAT CGAAGAGCCG
GAACAGCAGC TGCTATTTCC TTTGAATGCT TGA
 
Protein sequence
MFTYYPSVRF KQGERYALYR MPQDMKRHVE PRLIAPPIKE YDPELGRIPT LDEVIYLTGE 
RIGKHWPIGR AFLDLSFIAD EVGEVGIKRI LELAQIRNQE IVPVATLRDL QNPSLRDVRG
KGKIKLAVLV GYEEVEVESV RNALKEAGLD ASDCVIFLDF KGAPLKPEIA AGAVASIFDT
ANEIGRWQRI VFQASNFPSK NPAGHGESVL IPRDEWSAFH AAMLECGVAP ERVGYGDFAA
DSSEIKFPKK KKKGGGGRAI RHLRYATATH WFVVRAQSEG CDADLMRDVC QRISNSVHYE
GRSFSYADNR IFLVGQAKVG PGTASMWREW NTLHHITRVV RDLGAMAGVQ FADRPVIEEP
EQQLLFPLNA