8 homologs were found in PanDaTox collection
for query gene Svir_17090 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_17090  hypothetical protein  100 
 
 
362 aa  739    Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.385932 
 
 
-
 
NC_008782  Ajs_2452  hypothetical protein  26.52 
 
 
367 aa  80.9  0.00000000000004  Acidovorax sp. JS42  Bacteria  normal  0.388897  normal  0.887643 
 
 
-
 
NC_009075  BURPS668_A0032  hypothetical protein  27.57 
 
 
225 aa  62.4  0.00000001  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00000358988  n/a   
 
 
-
 
NC_010644  Emin_1452  hypothetical protein  23.24 
 
 
359 aa  60.1  0.00000006  Elusimicrobium minutum Pei191  Bacteria  normal  0.0107182  normal 
 
 
-
 
NC_007005  Psyr_4511  hypothetical protein  26.94 
 
 
362 aa  54.7  0.000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.139612 
 
 
-
 
NC_011891  A2cp1_3760  hypothetical protein  23.13 
 
 
377 aa  49.3  0.00009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.00000361746  n/a   
 
 
-
 
NC_007760  Adeh_3621  hypothetical protein  22.8 
 
 
377 aa  48.9  0.0001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0000926642  n/a   
 
 
 
NC_010658  SbBS512_E1452  hypothetical protein  21.46 
 
 
355 aa  42.7  0.009  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
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