9 homologs were found in PanDaTox collection
for query gene Sala_0522 on replicon NC_008048
Organism: Sphingopyxis alaskensis RB2256



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008048  Sala_0522  hypothetical protein  100 
 
 
196 aa  370  1e-102  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.275105 
 
 
-
 
NC_007794  Saro_2224  hypothetical protein  39.42 
 
 
196 aa  99  4e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0445  hypothetical protein  46.43 
 
 
210 aa  88.6  5e-17  Sphingomonas wittichii RW1  Bacteria  normal  0.548646  normal 
 
 
-
 
NC_007484  Noc_1590  hypothetical protein  30.97 
 
 
214 aa  53.9  0.000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5620  nutrient deprivation-induced protein  23.6 
 
 
189 aa  46.6  0.0003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.188949 
 
 
-
 
NC_007958  RPD_3870  hypothetical protein  36.07 
 
 
193 aa  45.4  0.0006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.679069  normal 
 
 
-
 
NC_007516  Syncc9605_2253  hypothetical protein  32.04 
 
 
140 aa  44.7  0.0009  Synechococcus sp. CC9605  Bacteria  normal  normal  0.122253 
 
 
-
 
NC_010571  Oter_4348  hypothetical protein  30.08 
 
 
197 aa  44.3  0.001  Opitutus terrae PB90-1  Bacteria  normal  0.915436  normal 
 
 
-
 
NC_007513  Syncc9902_0427  hypothetical protein  32.38 
 
 
140 aa  43.5  0.002  Synechococcus sp. CC9902  Bacteria  normal  0.163008  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>