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6 homologs were found in PanDaTox collection
for query gene
Rpic12D_4005
on replicon NC_012857
Organism:
Ralstonia pickettii 12D
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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score
E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010678
Rpic_3892
hypothetical protein
100
151 aa
308
2e-83
Ralstonia pickettii 12J
Bacteria
normal
1
normal
0.728328
-
NC_012857
Rpic12D_4005
protein of unknown function DUF1311
100
151 aa
308
2e-83
Ralstonia pickettii 12D
Bacteria
normal
0.575845
normal
1
-
NC_002947
PP_0821
hypothetical protein
29.59
136 aa
46.6
0.0001
Pseudomonas putida KT2440
Bacteria
normal
0.163557
normal
0.0923221
-
NC_010322
PputGB1_0862
hypothetical protein
29.59
128 aa
46.2
0.0001
Pseudomonas putida GB-1
Bacteria
normal
1
normal
1
-
NC_009512
Pput_0848
hypothetical protein
29.59
128 aa
45.8
0.0002
Pseudomonas putida F1
Bacteria
normal
1
normal
0.796587
-
NC_010501
PputW619_4365
hypothetical protein
28.57
128 aa
43.1
0.001
Pseudomonas putida W619
Bacteria
normal
0.751601
normal
0.995062
-
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