13 homologs were found in PanDaTox collection
for query gene Rpic12D_2142 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012856  Rpic12D_2142  hypothetical protein  100 
 
 		 309 aa  639    Ralstonia pickettii 12D  Bacteria  normal  0.0288655  normal  1 
 
 
-
 
NC_010682  Rpic_2549  hypothetical protein  46.4 
 
 		 294 aa  216  5e-55  Ralstonia pickettii 12J  Bacteria  normal  0.599646  normal  1 
 
 
-
 
NC_010678  Rpic_4350  hypothetical protein  41.43 
 
 		 293 aa  200  3e-50  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.00630082  normal  1 
 
 
-
 
NC_007974  Rmet_4488  hypothetical protein  40.15 
 
 		 288 aa  186  5e-46  Cupriavidus metallidurans CH34  Bacteria  normal  0.26168  normal  0.0904337 
 
 
-
 
NC_007651  BTH_I2351  hypothetical protein  38.27 
 
 		 321 aa  153  2.9999999999999998e-36  Burkholderia thailandensis E264  Bacteria  normal  0.593882  n/a   
 
 
-
 
NC_007651  BTH_I3271  hypothetical protein  40.51 
 
 		 259 aa  152  8.999999999999999e-36  Burkholderia thailandensis E264  Bacteria  normal  0.544466  n/a   
 
 
-
 
NC_009074  BURPS668_3907  putative bacteriophage-related protein  40.08 
 
 		 260 aa  148  1.0000000000000001e-34  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_1397  hypothetical protein  34.42 
 
 		 340 aa  107  3e-22  Ralstonia pickettii 12J  Bacteria  normal  0.0213294  normal  0.869405 
 
 
-
 
NC_007947  Mfla_1456  hypothetical protein  35 
 
 		 290 aa  104  1e-21  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  0.0289256 
 
 
-
 
NC_011830  Dhaf_2701  hypothetical protein  31.68 
 
 		 268 aa  63.2  0.000000006  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3595  hypothetical protein  28.99 
 
 		 301 aa  48.1  0.0002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.465668  decreased coverage  0.00093733 
 
 
-
 
NC_014151  Cfla_0617  hypothetical protein  27.57 
 
 		 251 aa  43.9  0.004  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  0.419644 
 
 
-
 
NC_009674  Bcer98_3979  Rep-related protein  27.59 
 
 		 251 aa  42.7  0.008  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
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