11 homologs were found in PanDaTox collection
for query gene Rpic12D_0622 on replicon NC_012856
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012856  Rpic12D_0622  hypothetical protein  100 
 
 
304 aa  597  1e-169  Ralstonia pickettii 12D  Bacteria  normal  0.892585  normal  0.437771 
 
 
-
 
NC_009669  Oant_4473  hypothetical protein  98.03 
 
 
304 aa  585  1e-166  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.43412  n/a   
 
 
-
 
NC_010084  Bmul_2300  hypothetical protein  91.78 
 
 
302 aa  496  1e-139  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.237935  normal 
 
 
-
 
NC_007947  Mfla_1165  hypothetical protein  96.88 
 
 
224 aa  431  1e-120  Methylobacillus flagellatus KT  Bacteria  normal  0.646579  normal  0.866745 
 
 
-
 
NC_007947  Mfla_1164  hypothetical protein  47.67 
 
 
295 aa  236  5.0000000000000005e-61  Methylobacillus flagellatus KT  Bacteria  normal  0.364262  normal  0.878784 
 
 
-
 
NC_012856  Rpic12D_0621  hypothetical protein  47.86 
 
 
295 aa  234  1.0000000000000001e-60  Ralstonia pickettii 12D  Bacteria  normal  normal  0.302849 
 
 
-
 
NC_009669  Oant_4474  hypothetical protein  47.31 
 
 
295 aa  216  4e-55  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.71086  n/a   
 
 
-
 
NC_010084  Bmul_2301  hypothetical protein  49.42 
 
 
295 aa  215  8e-55  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0409  hypothetical protein  42.24 
 
 
305 aa  174  9.999999999999999e-43  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.513472 
 
 
-
 
NC_007412  Ava_C0135  hypothetical protein  33.44 
 
 
347 aa  134  1.9999999999999998e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_007412  Ava_C0137  hypothetical protein  33.21 
 
 
300 aa  120  1.9999999999999998e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
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