Gene Sala_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0409 
Symbol 
ID4081728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp419189 
End bp420106 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID638008767 
Producthypothetical protein 
Protein accessionYP_615464 
Protein GI103485903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.513472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCA GAAATCTTGC CCATGGCGTT GCCGCCATCG CATTGCTTGC GGCTACGGCC 
TGTTCCGATA ATGCCGAGAA GGCGGCGGAC GGACAGGAAG CTTCGGCTAG CGCAACCGAT
ACGGATCAGG CTGCGGGCGG CGCCACGGCC GAGGATCAGG TGCAACTCGG AACTCTGCTG
AAGGAAGCGG TTTCCGCTCT CGATGAAACG CAGGCGGCTA TCAGCGCCAT TGACGCGGGC
AATAATAAAG GGGCGATCGA CGCTCTGGCC AGGGCCACGG GCAAACTTGA GATCATCCTG
ACGCGCGAAC CCAACCTGGC ACTTGCTCCG GTGGCCAATT CGGTCATCGA ACATGATGTT
CTTGCAACGC CAGGCGATGT CAAGGCGCTC TCCGACCGGA TCGAGGATCT GACTGATGAG
GGACGTTTGC AGGAAGCGAG GCGGCTTATG GAAGGCCTCG CAAGCGAGAT GGTTATCAGG
ACCAGCAACC TTCCGCTGGG TACCTATCCT GATGCCATCA AACGCGCGGC CGCACTGCTG
GACGAACAGA AGCCTCAGGA GGCCAAGCTC GTCTTGCTAA ACGCCCTGAG CACCATTGTC
GTGACCGAAA CCGTAATTCC CTTGCCGATC GTTCGTGCAG AGGCAAGCGT CGAGGCTGCG
CGGGTCGTTG CGGCAAAGGA GAACCGCACG GAACAAGACA ACCAGGCAAT CGCTGCGGAA
CTGCAGAAGG CCCGCGAGCA AATCGAGATG GCGCAAGCGC TCGGTTATGC AACCAAGAAG
GATCTTGACG ATCTGCAGGA CGCGATCAAA GAACTTGAGC GAGAGACTGG CGGGGGCAAT
GCTGCAACTC GCTTATTCGA ACGCATCAAG GGGCTTTTCG GCAAGGCCCG CGAAGCAGTA
CAGCCGACAA AGAATTGA
 
Protein sequence
MTFRNLAHGV AAIALLAATA CSDNAEKAAD GQEASASATD TDQAAGGATA EDQVQLGTLL 
KEAVSALDET QAAISAIDAG NNKGAIDALA RATGKLEIIL TREPNLALAP VANSVIEHDV
LATPGDVKAL SDRIEDLTDE GRLQEARRLM EGLASEMVIR TSNLPLGTYP DAIKRAAALL
DEQKPQEAKL VLLNALSTIV VTETVIPLPI VRAEASVEAA RVVAAKENRT EQDNQAIAAE
LQKAREQIEM AQALGYATKK DLDDLQDAIK ELERETGGGN AATRLFERIK GLFGKAREAV
QPTKN