Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0409 |
Symbol | |
ID | 4081728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 419189 |
End bp | 420106 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638008767 |
Product | hypothetical protein |
Protein accession | YP_615464 |
Protein GI | 103485903 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.513472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTCA GAAATCTTGC CCATGGCGTT GCCGCCATCG CATTGCTTGC GGCTACGGCC TGTTCCGATA ATGCCGAGAA GGCGGCGGAC GGACAGGAAG CTTCGGCTAG CGCAACCGAT ACGGATCAGG CTGCGGGCGG CGCCACGGCC GAGGATCAGG TGCAACTCGG AACTCTGCTG AAGGAAGCGG TTTCCGCTCT CGATGAAACG CAGGCGGCTA TCAGCGCCAT TGACGCGGGC AATAATAAAG GGGCGATCGA CGCTCTGGCC AGGGCCACGG GCAAACTTGA GATCATCCTG ACGCGCGAAC CCAACCTGGC ACTTGCTCCG GTGGCCAATT CGGTCATCGA ACATGATGTT CTTGCAACGC CAGGCGATGT CAAGGCGCTC TCCGACCGGA TCGAGGATCT GACTGATGAG GGACGTTTGC AGGAAGCGAG GCGGCTTATG GAAGGCCTCG CAAGCGAGAT GGTTATCAGG ACCAGCAACC TTCCGCTGGG TACCTATCCT GATGCCATCA AACGCGCGGC CGCACTGCTG GACGAACAGA AGCCTCAGGA GGCCAAGCTC GTCTTGCTAA ACGCCCTGAG CACCATTGTC GTGACCGAAA CCGTAATTCC CTTGCCGATC GTTCGTGCAG AGGCAAGCGT CGAGGCTGCG CGGGTCGTTG CGGCAAAGGA GAACCGCACG GAACAAGACA ACCAGGCAAT CGCTGCGGAA CTGCAGAAGG CCCGCGAGCA AATCGAGATG GCGCAAGCGC TCGGTTATGC AACCAAGAAG GATCTTGACG ATCTGCAGGA CGCGATCAAA GAACTTGAGC GAGAGACTGG CGGGGGCAAT GCTGCAACTC GCTTATTCGA ACGCATCAAG GGGCTTTTCG GCAAGGCCCG CGAAGCAGTA CAGCCGACAA AGAATTGA
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Protein sequence | MTFRNLAHGV AAIALLAATA CSDNAEKAAD GQEASASATD TDQAAGGATA EDQVQLGTLL KEAVSALDET QAAISAIDAG NNKGAIDALA RATGKLEIIL TREPNLALAP VANSVIEHDV LATPGDVKAL SDRIEDLTDE GRLQEARRLM EGLASEMVIR TSNLPLGTYP DAIKRAAALL DEQKPQEAKL VLLNALSTIV VTETVIPLPI VRAEASVEAA RVVAAKENRT EQDNQAIAAE LQKAREQIEM AQALGYATKK DLDDLQDAIK ELERETGGGN AATRLFERIK GLFGKAREAV QPTKN
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