9 homologs were found in PanDaTox collection
for query gene Rpal_0949 on replicon NC_011004
Organism: Rhodopseudomonas palustris TIE-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011004  Rpal_0949  putative membrane protein of unknown function  100 
 
 
338 aa  640    Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.764372  n/a   
 
 
-
 
NC_007958  RPD_0866  hypothetical protein  72.78 
 
 
345 aa  434  1e-121  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.638845 
 
 
-
 
NC_009485  BBta_4227  hypothetical protein  62.92 
 
 
336 aa  398  9.999999999999999e-111  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6390  hypothetical protein  32.47 
 
 
314 aa  119  7e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.206844  normal  0.098444 
 
 
-
 
NC_008062  Bcen_5517  hypothetical protein  32.8 
 
 
314 aa  109  6e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.370432  n/a   
 
 
-
 
NC_008544  Bcen2424_5881  hypothetical protein  32.8 
 
 
314 aa  109  6e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.469593 
 
 
-
 
NC_007509  Bcep18194_C7215  hypothetical protein  31.49 
 
 
314 aa  106  4e-22  Burkholderia sp. 383  Bacteria  normal  0.782627  normal 
 
 
-
 
NC_009654  Mmwyl1_3596  hypothetical protein  21.9 
 
 
303 aa  55.8  0.0000009  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_1414  hypothetical protein  27.51 
 
 
302 aa  46.2  0.0008  Jannaschia sp. CCS1  Bacteria  normal  0.358516  normal  0.0361775 
 
 
-
 
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