| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0949 |
|---|
| Symbol | |
|---|
| ID | 6408603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1010001 |
|---|
| End bp | 1011017 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642710863 |
|---|
| Product | putative membrane protein of unknown function |
|---|
| Protein accession | YP_001989982 |
|---|
| Protein GI | 192289377 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.764372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCG GTTTGCTGCG CGGGGCTGCG CTCCCCGTGA AGGGGCTCGC GTGGCTCGGC
CGGCAGGGGA CGAGGGCGAT CGCCGCTTTG GTGATCCTCG GACTGCTGGT GCCGCCGCTC
GGTGACATCC TAAGACCATT CGTCACCGAA GCGATCTTTG CACTGCTGTG CATCTCGTTC
ATGCGGGTTG ACGTCGCTCA GGTGCGCGCC AATCTCCGGC AGCCCGGGAC CGTGCTGGCG
GCGACCGCAT GGACTACCTT GGCGGTGCCG GCGCTTGCCG GCCTCGGCTG TCTCGCGGTC
GGGCTGGATG TACGCTCGCC GGATCTGTTT CTGGCGCTGA TGCTGCAGGC GGTCGCATCG
CCGATGATGG CCTCGCCGGC ACTTGCGGCA CTGATGGGGC TGGACGCGAC CCTGGTGCTG
ATCACGCTGG TGACCAGCAC GGCGCTGATC CCCTTCACCG CGCCGCTGTT CGCTTACCTG
TTCGTCGGCT CCGCGCTGAC GCTGTCGCCG CTGGCACTCG GGCTGAAGCT GTCGGCGATC
CTCGGCGGTT CGCTGCTGGT CGCGGCGATC ATCCGCAAGC TGGTGGGCGC GGATGCGATC
CGTCGCCACA AGGAGCCAAT CGACGGCATC AACATTCTGA TCCTGTACGT CTTCGTCGCG
GCCGTGATGG GCAATGTGGT GTCGAGCTTC ATCGCGCGGC CGTTGCTCAT GATCGCGCTC
ACGTTGTTCG CCTTTGCGGT GTTCCTGGTG CTCCTGGTCG CCACCATGCT CCTCTTCCGC
AAGATCGGTG CCGGCCGCGC GTTGGCGCTC GGCCTGATGG TGTCGCAGCG GAATATGGGA
CTGATGCTGG CGGCGACCGA CGGCGTACTG CCGGGCGCGA CCTGGCTGTA TTTCGCGCTG
TCGCAGTTTC CGATCTACCT GGCGCCGCAG TTGCTCAAAC CGATCGCGCG CCGGGTGCTG
GCCCGGCCGT CGTTCGATGC CGCTGGCGAG CCGGTGTCGT CGCCGGCTAA TCGTTGA
|
|---|
| Protein sequence | MTIGLLRGAA LPVKGLAWLG RQGTRAIAAL VILGLLVPPL GDILRPFVTE AIFALLCISF
MRVDVAQVRA NLRQPGTVLA ATAWTTLAVP ALAGLGCLAV GLDVRSPDLF LALMLQAVAS
PMMASPALAA LMGLDATLVL ITLVTSTALI PFTAPLFAYL FVGSALTLSP LALGLKLSAI
LGGSLLVAAI IRKLVGADAI RRHKEPIDGI NILILYVFVA AVMGNVVSSF IARPLLMIAL
TLFAFAVFLV LLVATMLLFR KIGAGRALAL GLMVSQRNMG LMLAATDGVL PGATWLYFAL
SQFPIYLAPQ LLKPIARRVL ARPSFDAAGE PVSSPANR
|
|---|
| |