Gene BBta_4227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4227 
Symbol 
ID5149003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4440762 
End bp4441772 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content69% 
IMG OID640559052 
Producthypothetical protein 
Protein accessionYP_001240189 
Protein GI148255604 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATATT CCGGGCCACT CGCTGTTCCG CTGCAGGCCC TGAACTGGCT CGGCAATCAG 
GGCACGCGCG CGATCGTCGC CGTGCTCCTG GCCGCAATCG CGGTGCCGCC GCTTGGCGAG
CTGCTGCGGC CCTACGTCAC CGAAGCGATC TTCCTCTTGC TCTGCATCTC CTTCATGCGC
GTCGACGTCG CGATGCTGCG CGCGCATCTG CGCCGGCCGC TGCTGGTGCT GTCCGCGACC
GCCTGGACCA CCATCGCCGT GCCGCTTCTG GTCGGCATGC TCACGCGCGT CACCGGGGTG
GAGGCCGGCA CGCCCGACCT GCATCTCGCC TTGATGCTGC AGGCGACCGC CTCGCCGATG
ATGGCCTCGC CCGCGCTCGC CGCCCTGATG GGGCTGGACG CGACGCTGGT GCTGATCACG
CTGGTGACCT CGACCGCGCT GGTGCCGCTG ACGGCCCCGT TCTTCGCCTA TGTCTTCCTG
GGCCAGACGC TGGCGCTGTC ACCCGCAACG CTTGGGCTGA AGCTCGCCGG CATCCTCGCC
GGCGCGGGCG TCGTCGCCAC GCTCATCCGC CTGGCCTTCG GCTTGGCAGC AGTGCGCCGC
CATCGCGCGC CGATCGACGG CTTCAACATC TGCATCCTGT TCGTGTTCGC GTCCGCGATC
ATGGCCCATG TGCTGGCCGA CCTCGTCGCA ACTCCGTTGC GCATGCTGGG CCTCGCAGCG
CTCGCCTTCG CTGTGTTCTT CCTGCTGCTC GGGACCACGA TGCTGCTGTT CCGCCGCTGT
GGCCGCGAAC GCGCGATGGC GCTGGGCATG ATGGTCTCAC TGCGCAACAT GGGGCTGATG
CTGGCAGCGA CCGAAGGCGC GATCCCGGGC ACCACCTGGC TGTATTTCGC GATGAGTCAG
TTTCCGATCC ACCTCGCGCC ACAGCTGCTG CGGCCGTTCG CCGAACGGCT GCGCAAGCCG
CCGTCAACCG TCGACGGCGA TCAGGACCTG GTCAGTCCGG CGCGGAAATG A
 
Protein sequence
MPYSGPLAVP LQALNWLGNQ GTRAIVAVLL AAIAVPPLGE LLRPYVTEAI FLLLCISFMR 
VDVAMLRAHL RRPLLVLSAT AWTTIAVPLL VGMLTRVTGV EAGTPDLHLA LMLQATASPM
MASPALAALM GLDATLVLIT LVTSTALVPL TAPFFAYVFL GQTLALSPAT LGLKLAGILA
GAGVVATLIR LAFGLAAVRR HRAPIDGFNI CILFVFASAI MAHVLADLVA TPLRMLGLAA
LAFAVFFLLL GTTMLLFRRC GRERAMALGM MVSLRNMGLM LAATEGAIPG TTWLYFAMSQ
FPIHLAPQLL RPFAERLRKP PSTVDGDQDL VSPARK