7 homologs were found in PanDaTox collection
for query gene RoseRS_4493 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_4493  hypothetical protein  100 
 
 
308 aa  627  1e-179  Roseiflexus sp. RS-1  Bacteria  normal  decreased coverage  0.000612564 
 
 
-
 
NC_013159  Svir_33340  hypothetical protein  34.22 
 
 
1414 aa  85.1  0.000000000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.774424  normal 
 
 
-
 
NC_013093  Amir_4585  hypothetical protein  35.71 
 
 
1414 aa  78.6  0.0000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2644  hypothetical protein  35.9 
 
 
976 aa  71.2  0.00000000002  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00661972 
 
 
-
 
NC_014151  Cfla_3694  hypothetical protein  30.82 
 
 
1357 aa  63.5  0.000000004  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4506  putative cell wall binding repeat 2-containing protein  27.04 
 
 
619 aa  60.8  0.00000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.417765  n/a   
 
 
-
 
NC_009953  Sare_5073  hypothetical protein  33.03 
 
 
1349 aa  58.9  0.0000001  Salinispora arenicola CNS-205  Bacteria  normal  0.528473  hitchhiker  0.000168425 
 
 
-
 
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