Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4493 |
Symbol | |
ID | 5211478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5632845 |
End bp | 5633771 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640598072 |
Product | hypothetical protein |
Protein accession | YP_001278775 |
Protein GI | 148658570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000612564 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTGCAGGG AGAGAGCGAT GTCAATGCGT TATGCACACT TTCAACCTCT GTTCAGAGCC GGACGATTGT TACTGTGTAT GGCCTCGCTC AGCTTTCTTC TCCTGGCCCA GACGAGTGAC CCTTCGCGAT GTGCAGCCCA GGGAAGCTGC CCTGTGCCTG CCGCTTATGG TCGACAGCCT TATCCTGGCG AGTTGATTAA TGCTTTCGAT CGTGCGGGCA CTAACCGTTT AGGGAACGAG GGTCCGAGTC TGCCTCAGAT CTGGAAGGGA TATCCTTCCT CGCAGGCCAG GTTGGTCTCT CCCTACGTGC CTTGTATACT TCTCAAAGTC ATTGGCTATA CGGAAAGCGC TGGCTGGAAA CAGTTTGCTG CCGATTATGG GCGTTATGGC TACACGGTAG TCAGCGCAGA TTGTGGCTAT GGCATTATGC AAATCACTTC CGGTATGGGG GGTGGAGCAG GCTTTGAACC TGGCAGGGTA GCCGCCGAGC CCGCCTATAA CATCGGTACC GGTGCACGCG TCCTGATCCA GAAATGGAAT AGTCTGAATG TTTATATTGG CAACAACAAC CCTTACGTAG TCGAGGACTG GTACTACGCG GTCTGGGCCT ATAATGGATG GGGATGGGTC AACAATCCGA ATCGTAATTG CCCGGATAAC AATCCAAATT GTGGATACGC TTTCAACCCT TTCCGTCCTT CCTTCAATGG ATCACAACCG CGATCCTGGT ATCCCTATCA AGAAATTATC TGGGGGTATG CCGGTCATCC TCCTAGCGCC GGGTTTTGGG AAGCGGTACC ACTTACGCTG CCGTCCAGAC GGTCTATCAC CAATCCGCCA CCACCACACA TCGTCACACC CCGGCCATCC CATGGCTCGT GCAGTGTAGT CTATCTACCG GCTATACTCA AGAATTATCC ACGCTGA
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Protein sequence | MCRERAMSMR YAHFQPLFRA GRLLLCMASL SFLLLAQTSD PSRCAAQGSC PVPAAYGRQP YPGELINAFD RAGTNRLGNE GPSLPQIWKG YPSSQARLVS PYVPCILLKV IGYTESAGWK QFAADYGRYG YTVVSADCGY GIMQITSGMG GGAGFEPGRV AAEPAYNIGT GARVLIQKWN SLNVYIGNNN PYVVEDWYYA VWAYNGWGWV NNPNRNCPDN NPNCGYAFNP FRPSFNGSQP RSWYPYQEII WGYAGHPPSA GFWEAVPLTL PSRRSITNPP PPHIVTPRPS HGSCSVVYLP AILKNYPR
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