Gene RoseRS_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_4493 
Symbol 
ID5211478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp5632845 
End bp5633771 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content53% 
IMG OID640598072 
Producthypothetical protein 
Protein accessionYP_001278775 
Protein GI148658570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000612564 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTGCAGGG AGAGAGCGAT GTCAATGCGT TATGCACACT TTCAACCTCT GTTCAGAGCC 
GGACGATTGT TACTGTGTAT GGCCTCGCTC AGCTTTCTTC TCCTGGCCCA GACGAGTGAC
CCTTCGCGAT GTGCAGCCCA GGGAAGCTGC CCTGTGCCTG CCGCTTATGG TCGACAGCCT
TATCCTGGCG AGTTGATTAA TGCTTTCGAT CGTGCGGGCA CTAACCGTTT AGGGAACGAG
GGTCCGAGTC TGCCTCAGAT CTGGAAGGGA TATCCTTCCT CGCAGGCCAG GTTGGTCTCT
CCCTACGTGC CTTGTATACT TCTCAAAGTC ATTGGCTATA CGGAAAGCGC TGGCTGGAAA
CAGTTTGCTG CCGATTATGG GCGTTATGGC TACACGGTAG TCAGCGCAGA TTGTGGCTAT
GGCATTATGC AAATCACTTC CGGTATGGGG GGTGGAGCAG GCTTTGAACC TGGCAGGGTA
GCCGCCGAGC CCGCCTATAA CATCGGTACC GGTGCACGCG TCCTGATCCA GAAATGGAAT
AGTCTGAATG TTTATATTGG CAACAACAAC CCTTACGTAG TCGAGGACTG GTACTACGCG
GTCTGGGCCT ATAATGGATG GGGATGGGTC AACAATCCGA ATCGTAATTG CCCGGATAAC
AATCCAAATT GTGGATACGC TTTCAACCCT TTCCGTCCTT CCTTCAATGG ATCACAACCG
CGATCCTGGT ATCCCTATCA AGAAATTATC TGGGGGTATG CCGGTCATCC TCCTAGCGCC
GGGTTTTGGG AAGCGGTACC ACTTACGCTG CCGTCCAGAC GGTCTATCAC CAATCCGCCA
CCACCACACA TCGTCACACC CCGGCCATCC CATGGCTCGT GCAGTGTAGT CTATCTACCG
GCTATACTCA AGAATTATCC ACGCTGA
 
Protein sequence
MCRERAMSMR YAHFQPLFRA GRLLLCMASL SFLLLAQTSD PSRCAAQGSC PVPAAYGRQP 
YPGELINAFD RAGTNRLGNE GPSLPQIWKG YPSSQARLVS PYVPCILLKV IGYTESAGWK
QFAADYGRYG YTVVSADCGY GIMQITSGMG GGAGFEPGRV AAEPAYNIGT GARVLIQKWN
SLNVYIGNNN PYVVEDWYYA VWAYNGWGWV NNPNRNCPDN NPNCGYAFNP FRPSFNGSQP
RSWYPYQEII WGYAGHPPSA GFWEAVPLTL PSRRSITNPP PPHIVTPRPS HGSCSVVYLP
AILKNYPR