7 homologs were found in PanDaTox collection
for query gene Rmet_5570 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007974  Rmet_5570  hypothetical protein  100 
 
 
168 aa  329  1e-89  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5198  hypothetical protein  72.62 
 
 
168 aa  251  3e-66  Ralstonia eutropha JMP134  Bacteria  normal  0.123467  n/a   
 
 
-
 
NC_010577  XfasM23_0841  hypothetical protein  42.04 
 
 
182 aa  114  6e-25  Xylella fastidiosa M23  Bacteria  normal  0.468496  n/a   
 
 
-
 
NC_010513  Xfasm12_0958  hypothetical protein  42.68 
 
 
182 aa  109  2.0000000000000002e-23  Xylella fastidiosa M12  Bacteria  normal  0.169341  n/a   
 
 
-
 
NC_010717  PXO_03058  hypothetical protein  41.1 
 
 
179 aa  100  1e-20  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3449  hypothetical protein  38.06 
 
 
252 aa  98.6  4e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_0435  hypothetical protein  37.2 
 
 
180 aa  92.4  2e-18  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.770798  normal  0.533007 
 
 
-
 
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