Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3449 |
Symbol | |
ID | 1171123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3592481 |
End bp | 3593239 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637345256 |
Product | hypothetical protein |
Protein accession | NP_719001 |
Protein GI | 24374958 |
COG category | [S] Function unknown |
COG ID | [COG3831] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTT TACAAACCCG TTATTTTGAG CTGTCCAATC CTACTACGGG CGAGCATAAA TTCTACGAGC TGACATTGCA TGAAGACGGC ACTCTAATCA GCCGCTATGG GCGCATCGGT GCCAATGGCC AAAACAAAAC TCAGCAATTT AACAGTGTTG AAGCCATGCT CAAGGCTGCG GATAAAACCA CTGCAGAGAA GCTCAACAAG GGCTACCAAG TGGCCAATGC AGGTGAAACC GCAGCTCAGG AAACCAGGCA TCAACGCATT TTACGCAACG TGCGCGAGTT TTATGAGCTA ATTAGCAATG GCGACAGCAA ACTTGCCCAG CGCTGTAGCG TAGAATTTAA AGCTTTCATC GAAGACGAAG ACAATAAAGA AGAGTATGAA GATCAGGATA ACGAACTGAT TAATAATGGC ATTAGAGAAG CTGCCGATTG GGAATTGGTG TTTTTCGTTG ATTGGAAAGA CACAGAATCC ATGCTCGACG TGCTCGATAC TCTGTGCAGT AATCTCAACA TCGACATTGT TTTTGACTGG GGCTGCGACG TTCCTGAAGA TGAGCTGAAG GTTGGTCAGA TTATGCTCTT GGCCCACGAG CAACTGCAAC AGCAAGGTTT TGCACTCTGG CACTGGGATA CTGGCCATGA CGCGTATTTG GGCTGGATTG CCCGCATGGC TTATCAAACA CAAATTGCCA GCTGTGTGCA GGCCTTAGAT CTGGATGCCG CTTATCCCAA CCCAGAAAAA CTCACTTAG
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Protein sequence | MDILQTRYFE LSNPTTGEHK FYELTLHEDG TLISRYGRIG ANGQNKTQQF NSVEAMLKAA DKTTAEKLNK GYQVANAGET AAQETRHQRI LRNVREFYEL ISNGDSKLAQ RCSVEFKAFI EDEDNKEEYE DQDNELINNG IREAADWELV FFVDWKDTES MLDVLDTLCS NLNIDIVFDW GCDVPEDELK VGQIMLLAHE QLQQQGFALW HWDTGHDAYL GWIARMAYQT QIASCVQALD LDAAYPNPEK LT
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