7 homologs were found in PanDaTox collection
for query gene Rmet_2474 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007973  Rmet_2474  entericidin EcnAB  100 
 
 
44 aa  87.8  5e-17  Cupriavidus metallidurans CH34  Bacteria  normal  0.222579  normal  0.376001 
 
 
-
 
NC_007347  Reut_A2313  entericidin EcnAB  78.05 
 
 
42 aa  65.1  0.0000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.54288  n/a   
 
 
-
 
NC_003296  RS03154  lipoprotein transmembrane  63.41 
 
 
46 aa  43.5  0.0009  Ralstonia solanacearum GMI1000  Bacteria  normal  0.801084  normal  0.170965 
 
 
-
 
NC_010678  Rpic_4173  Entericidin EcnAB  63.41 
 
 
46 aa  42.4  0.002  Ralstonia pickettii 12J  Bacteria  normal  0.653132  normal 
 
 
-
 
NC_012857  Rpic12D_4285  Entericidin EcnAB  63.41 
 
 
46 aa  42.4  0.002  Ralstonia pickettii 12D  Bacteria  normal  normal  0.542737 
 
 
-
 
NC_007974  Rmet_4767  entericidin AB  60.71 
 
 
42 aa  40.8  0.007  Cupriavidus metallidurans CH34  Bacteria  normal  0.718834  normal 
 
 
-
 
NC_007947  Mfla_2631  entericidin EcnAB  45.45 
 
 
44 aa  40  0.01  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>