11 homologs were found in PanDaTox collection
for query gene Rmet_2323 on replicon NC_007973
Organism: Cupriavidus metallidurans CH34



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007973  Rmet_2323  hypothetical protein  100 
 
 		 113 aa  233  5.0000000000000005e-61  Cupriavidus metallidurans CH34  Bacteria  hitchhiker  0.00000138331  hitchhiker  0.0000021382 
 
 
-
 
NC_008782  Ajs_1292  hypothetical protein  89.52 
 
 		 107 aa  199  9.999999999999999e-51  Acidovorax sp. JS42  Bacteria  normal  0.597741  normal  0.806179 
 
 
-
 
NC_008782  Ajs_1426  hypothetical protein  91.43 
 
 		 113 aa  199  9.999999999999999e-51  Acidovorax sp. JS42  Bacteria  normal  0.0387332  normal  0.841002 
 
 
-
 
NC_009719  Plav_3401  hypothetical protein  82.41 
 
 		 108 aa  185  2e-46  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.522628 
 
 
-
 
NC_007951  Bxe_A1207  hypothetical protein  63.81 
 
 		 110 aa  131  3e-30  Burkholderia xenovorans LB400  Bacteria  normal  0.298612  normal  1 
 
 
-
 
NC_012912  Dd1591_0460  plasmid-related protein  61.86 
 
 		 114 aa  129  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_008826  Mpe_B0127  hypothetical protein  44.09 
 
 		 262 aa  75.1  0.0000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  0.112785  hitchhiker  0.0000602842 
 
 
-
 
NC_009788  EcE24377A_D0069  hypothetical protein  43.04 
 
 		 154 aa  65.5  0.0000000002  Escherichia coli E24377A  Bacteria  normal  0.536383  n/a   
 
 
-
 
NC_010679  Bphyt_7322  hypothetical protein  39.29 
 
 		 198 aa  62  0.000000003  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.0000508641  hitchhiker  0.000788064 
 
 
-
 
NC_008752  Aave_2775  hypothetical protein  32.98 
 
 		 114 aa  52.8  0.000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.403791  normal  1 
 
 
-
 
NC_008752  Aave_2777  plasmid-related protein  32.98 
 
 		 107 aa  42.4  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.727317  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>