Gene Plav_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3401 
Symbol 
ID5455904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3639028 
End bp3639354 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content61% 
IMG OID640878990 
Producthypothetical protein 
Protein accessionYP_001414661 
Protein GI154253837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.522628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA TCGATTGCGA TACACCCCGT TCTTCGCTGG GTGAACCCGC GTGGCGAGCT 
GTTTGCAAGA CAGCCGCCGA GCACGCCCAG CGTGGTTGTG GCCTGTCCTG GGACCACTGG
GTCACGCTTT TCAGTTCGGA GATCGACGCG CAAGCCAGTC GATTGCCGGA AGAGCAACGC
GCACAGGCGC TGCAGATCGC ACAGGAATGG GGCTACGCCA CACCGGCCGA AAGGCAGGAA
ACCCAGGACT GGAACGCCGA AAACGGCTAC TGCTCGCACG GAATCGAACT GGGTTATTGC
CCGTCCGGTT GCGATTCGGA CTATTGA
 
Protein sequence
MSTIDCDTPR SSLGEPAWRA VCKTAAEHAQ RGCGLSWDHW VTLFSSEIDA QASRLPEEQR 
AQALQIAQEW GYATPAERQE TQDWNAENGY CSHGIELGYC PSGCDSDY