5 homologs were found in PanDaTox collection
for query gene RPD_R0051 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_R0051    100 
 
 
199 bp  394  1e-108  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0245414  normal  0.84746 
 
 
-
 
NC_007925  RPC_R0012  Cobalamin riboswitch  83.83 
 
 
198 bp  93.7  2e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.414583  normal  0.873584 
 
 
-
 
NC_007958  RPD_R0049    100 
 
 
208 bp  48.1  0.001  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.127314  normal  0.581672 
 
 
-
 
NC_007964  Nham_R0063    100 
 
 
206 bp  48.1  0.001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_R0050    90.7 
 
 
209 bp  46.1  0.004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.193277  normal  0.586253 
 
 
-
 
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