5 homologs were found in PanDaTox collection
for query gene RPD_3685 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_3685    100 
 
 
228 bp  452  1e-125  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1861  hypothetical protein  88.24 
 
 
336 bp  54  0.00002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2168  Integrase catalytic region  86.44 
 
 
843 bp  54  0.00002  Acidovorax ebreus TPSY  Bacteria  normal  0.0614321  n/a   
 
 
-
 
NC_011992  Dtpsy_3327  Integrase catalytic region  86.44 
 
 
843 bp  54  0.00002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1865  hypothetical protein  88 
 
 
918 bp  52  0.00007  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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