Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3327 |
Symbol | |
ID | 7385226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3554670 |
End bp | 3555512 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643656650 |
Product | Integrase catalytic region |
Protein accession | YP_002554756 |
Protein GI | 222112492 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAC ACCGAGGAAT CTGGCCGGTG GTGGTGATGT GCGACGCGCT CGGTGTCTCG CGAAGTGGCT TCTATGACTG GCTGGATCGA CCGCCAAGCC AGCGCAGCCT GACCAACGAG GCGCTGGCCA AGCAGGTCAA GCAAAGCTTC GTGAACAGCG ACAGGACCTA TGGCGCACGC CGGGTCTGGC GCGACGTGCT CGCCAGCGGC TTGAACTGTG GCCTGCACCT GGTCGAGAAG CTCATGCAGC AGCAGGCGCT GCGTGCCAGA CCGAGACGGC GTGGTCTGCC CAAGGACGAA GGCCAGCGCA GCGAGATCGC CGACAACCTG CTGGAGCGTC AATTCAAGGC AGACGCTCCG AACCAGAAGT GGGTGGCCGA CTTCACCTAC ATCTGGACCG CCGAGGGGTG GTTGTACGTG GCGGTGGTGT TGGACCTGTA CTCGCGCAGG GCGGTGGGTT GGTCCATGCA GGCCAGCATG ACCTCGCAGT TGGTGGCCGA TGCCTTGATG ATGGCGGTCT GGCGGCGCGG CAAACCCGCA GCGCGAATGC ACCACTCGGA CCAGGGCAGC CAATACACCA GCGGGCACTT CCAGCAGTTG CTCAAGGAAC AAGGGATCAC GTGCAGCATG AGCCGTGCTG GCGAGGTCTG GGACAACTCG GCGATGGAAA GCTTCTTCAG CTCAATGAAG ACCGAACGCA TCGCGCGCAA GGTCTACAGA ACCCGAGAGG AGGCGCGGGC TGATGTGTTC GACTACATCG AGCGGTTCTA CAACCCGACT CGGCGGCACT CGACGATCGG CTACGTCAGC CCAGTACAGT TCGAACAAGC TCAAGGAGCT TAG
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Protein sequence | MAKHRGIWPV VVMCDALGVS RSGFYDWLDR PPSQRSLTNE ALAKQVKQSF VNSDRTYGAR RVWRDVLASG LNCGLHLVEK LMQQQALRAR PRRRGLPKDE GQRSEIADNL LERQFKADAP NQKWVADFTY IWTAEGWLYV AVVLDLYSRR AVGWSMQASM TSQLVADALM MAVWRRGKPA ARMHHSDQGS QYTSGHFQQL LKEQGITCSM SRAGEVWDNS AMESFFSSMK TERIARKVYR TREEARADVF DYIERFYNPT RRHSTIGYVS PVQFEQAQGA
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