10 homologs were found in PanDaTox collection
for query gene RPD_2293 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_2293  hypothetical protein  100 
 
 
136 aa  280  5.000000000000001e-75  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0549  hypothetical protein  84.33 
 
 
150 aa  242  9.999999999999999e-64  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1231  hypothetical protein  38.46 
 
 
163 aa  91.3  4e-18  Sinorhizobium medicae WSM419  Bacteria  normal  0.231213  normal  0.21928 
 
 
-
 
NC_009943  Dole_2089  hypothetical protein  40.38 
 
 
141 aa  86.3  1e-16  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0117694  n/a   
 
 
-
 
NC_009720  Xaut_0554  hypothetical protein  37.3 
 
 
164 aa  84.3  5e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  0.238439  normal  0.708141 
 
 
-
 
NC_007490  RSP_4247  hypothetical protein  34.43 
 
 
160 aa  82.4  0.000000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.356623  n/a   
 
 
-
 
NC_007948  Bpro_1540  hypothetical protein  40.96 
 
 
160 aa  70.5  0.000000000008  Polaromonas sp. JS666  Bacteria  normal  0.712967  normal  0.573088 
 
 
-
 
NC_007760  Adeh_1740  hypothetical protein  33.88 
 
 
146 aa  65.9  0.0000000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.792895  n/a   
 
 
-
 
NC_012850  Rleg_1586  hypothetical protein  32.48 
 
 
206 aa  62  0.000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0267277  normal  0.749174 
 
 
-
 
NC_013730  Slin_4859  hypothetical protein  35.23 
 
 
549 aa  57.4  0.00000007  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.0000408523  normal  0.694219 
 
 
-
 
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