Gene Smed_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1231 
Symbol 
ID5322078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp1312302 
End bp1312793 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content60% 
IMG OID640790172 
Producthypothetical protein 
Protein accessionYP_001326916 
Protein GI150396449 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.231213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.21928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATCC TGTCGATTGA CGACCAGATC GAGCGCATGA ACGCGGTATT GCCGGAATGG 
AAGGCCACGC GGGAGGACGA TCGGACCGCG ACCTGGATCG GGAGCCTGCG CCCCAACAAG
ACCAGCTACC GTGTCAGGAT CTTCTATCGG GTCCCGAGGC TGCTCGAAAA CACGACTGTC
AAACAGGTCC AGCCCCGTGT GTTCATCGAC AGCCCGAAGC TGATGCCGAA CGCCGATGGT
GAACTGCCCC ACGTGTACTG GCCAAAAGGA AATCCGACGG CAGGCGATCC TTGCCTGTGC
CTGTTCGATC CGGATCACGA ATGGTCAATA TGCGACTTTC TGGCAGACAC CACGGTTCCT
TGGTCGAGCA CGTGGCTTTA CTGGTATGAG GTCTGGAGGG TCAGCAACGT GTGGTTCGGC
CCTGCCCGGC ATGAAGGAGA AGAGGGCGAT GCAGCACGAG GCTCCGCCGA AGCCGAGATC
GCGAAGGTCT GA
 
Protein sequence
MKILSIDDQI ERMNAVLPEW KATREDDRTA TWIGSLRPNK TSYRVRIFYR VPRLLENTTV 
KQVQPRVFID SPKLMPNADG ELPHVYWPKG NPTAGDPCLC LFDPDHEWSI CDFLADTTVP
WSSTWLYWYE VWRVSNVWFG PARHEGEEGD AARGSAEAEI AKV