10 homologs were found in PanDaTox collection
for query gene RPC_4143 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_4143  YcfA-like  100 
 
 		 64 aa  135  1e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.166657  normal  1 
 
 
-
 
NC_011004  Rpal_4826  YcfA family protein  82.81 
 
 		 64 aa  121  4e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0742  YcfA family protein  64.06 
 
 		 64 aa  94.4  5e-19  Meiothermus ruber DSM 1279  Bacteria  normal  0.837375  normal  1 
 
 
-
 
NC_011884  Cyan7425_2635  YcfA family protein  63.49 
 
 		 65 aa  90.1  1e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.928162  normal  1 
 
 
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NC_011901  Tgr7_1810  YcfA family protein  63.49 
 
 		 65 aa  89  2e-17  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.840265  n/a   
 
 
-
 
NC_002967  TDE0452  hypothetical protein  57.81 
 
 		 64 aa  85.5  2e-16  Treponema denticola ATCC 35405  Bacteria  normal  0.0486055  n/a   
 
 
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NC_007778  RPB_4129  YcfA-like  58.06 
 
 		 65 aa  80.9  0.000000000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0904081  normal  1 
 
 
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NC_007925  RPC_0973  YcfA-like  56.45 
 
 		 65 aa  78.2  0.00000000000004  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.254811  hitchhiker  0.00147891 
 
 
-
 
NC_008309  HS_1413  hypothetical protein  57.41 
 
 		 65 aa  69.7  0.00000000001  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.00000113002  n/a   
 
 
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NC_010000  Sbal195_4681  YcfA family protein  51.92 
 
 		 60 aa  53.1  0.000001  Shewanella baltica OS195  Bacteria  n/a    n/a   
 
 
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