10 homologs were found in PanDaTox collection
for query gene RPC_3004 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_3004  putative general secretion pathway protein J  100 
 
 		 234 aa  461  1e-129  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.214462 
 
 
-
 
NC_007964  Nham_0736  putative general secretion pathway protein J  52.31 
 
 		 245 aa  182  3e-45  Nitrobacter hamburgensis X14  Bacteria  normal  0.185965  n/a   
 
 
-
 
NC_009485  BBta_1283  putative general secretion pathway protein J, GspJ  44.55 
 
 		 245 aa  169  5e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.44397  normal  1 
 
 
-
 
NC_009485  BBta_2616  putative general secretion pathway protein J  43.06 
 
 		 234 aa  168  7e-41  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_2112  putative general secretion pathway protein J  42.08 
 
 		 237 aa  159  3e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0110516  normal  1 
 
 
-
 
NC_011666  Msil_0915  putative general secretion pathway protein J  43.12 
 
 		 254 aa  159  3e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  0.428557 
 
 
-
 
NC_011899  Hore_18650  prepilin-type N-terminal cleavage/methylation domain protein  24.34 
 
 		 190 aa  49.3  0.00006  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA1119  general secretory pathway protein J  30.65 
 
 		 200 aa  46.6  0.0003  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2703  hypothetical protein  25.61 
 
 		 167 aa  42.4  0.006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.345909 
 
 
-
 
NC_011891  A2cp1_0715  hypothetical protein  30.26 
 
 		 220 aa  42  0.008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
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