| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3004 |
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| Symbol | |
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| ID | 3973246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 3300385 |
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| End bp | 3301089 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637926115 |
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| Product | putative general secretion pathway protein J |
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| Protein accession | YP_532868 |
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| Protein GI | 90424498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.214462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC CGCTCGCTCG CGCGCAACGG GAAGATGCCG GCTTCACCCT GTTTGAGGCG
CTGGTCGCCA TCGCGTTGAT GGGACTGATC CTGGGTGCGC TGGCGACGGT GACGGCGCAG
TGGTTGCCGA ACTGGAATCG TGGTCTGGTT CGTGCCCAAC GCAACGAGCA GGCGGCGATC
GTGCTCGACC GCCTGGTGGC CGACCTATCG GCGGCCGAGT ATGTTTCGGC GAGTCGCTTG
AGAAACGTCC CGCTGTTCAG GGGCGCCGAG TTTGCCGTCG TTTTTGTACG TTCGGCGTTG
GGTCCGAATG GCCGTCCCGG ACTTGAGATC GTGCAGATCG CCGAAACCGC CGACAGCCGC
GGACCGGCGC TGGTCCGCAC GCGCGCTCCC TTCGTTCCAC TGCCGACCGG GGATCCGCAG
GTCGATCCGA TTCCGTTTGC AGATCCCGTT GTGTTGCTGC GCCCGCCGCT GCACCTCGCG
TTCGCCTACG CCGGGGCCGA CGGCAATTGG AAGCGCGCCT GGCGGCCATC GGGCGAGTTG
CCGAGCGCGG TTCGCTTTGA TGTCCATGAC TCCGAGCGCG GAACGCTGAT TTCCACCGCG
ACCAGGATTC ACATCGAAAT GCGAGCGCCG CGACCGGAAA CGGCCGGCGA GGCGGCCGAG
GAAAATGCTC AGCCGCAACC CGGCGGCGCG ACGGGGGGAC AATGA
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| Protein sequence | MSRPLARAQR EDAGFTLFEA LVAIALMGLI LGALATVTAQ WLPNWNRGLV RAQRNEQAAI
VLDRLVADLS AAEYVSASRL RNVPLFRGAE FAVVFVRSAL GPNGRPGLEI VQIAETADSR
GPALVRTRAP FVPLPTGDPQ VDPIPFADPV VLLRPPLHLA FAYAGADGNW KRAWRPSGEL
PSAVRFDVHD SERGTLISTA TRIHIEMRAP RPETAGEAAE ENAQPQPGGA TGGQ
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